RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 FAM208BQ5VWN6 2430 aa-0.12□□□□□ -2.43
SMC4-205ENST00000465563 ABCA2Q9BZC7 2435 aa-0.13□□□□□ -2.43
SMC4-205ENST00000465563 GOLGA3Q08378 1498 aa-0.13□□□□□ -2.43
SMC4-205ENST00000465563 IBTKQ9P2D0 1353 aaPredicted RBP-0.13□□□□□ -2.43
SMC4-205ENST00000465563 TRGV1A0A0A0MS02 117 aa-0.13□□□□□ -2.43
SMC4-205ENST00000465563 M0R2Z0 102 aa-0.13□□□□□ -2.43
SMC4-205ENST00000465563 NPFFO15130 113 aa-0.13□□□□□ -2.43
SMC4-205ENST00000465563 APODP05090 189 aa-0.13□□□□□ -2.43
SMC4-205ENST00000465563 PLXNB2O15031 1838 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 SPEF2Q9C093 1822 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 TMEM14DPA8MWL7 114 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 ACYP2P14621 99 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 INSL4Q14641 139 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 SMIM21Q3B7S5 101 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 DOPEY2Q9Y3R5 2298 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 PTPRQQ9UMZ3 2332 aa-0.14□□□□□ -2.43
SMC4-205ENST00000465563 G3V318 75 aa-0.15□□□□□ -2.43
SMC4-205ENST00000465563 J3QR89 54 aa-0.15□□□□□ -2.43
SMC4-205ENST00000465563 EDDM3BP56851 147 aa-0.15□□□□□ -2.43
SMC4-205ENST00000465563 UBE2G1P62253 170 aa-0.15□□□□□ -2.43
SMC4-205ENST00000465563 ANP32BQ92688 251 aaKnown RBP-0.15□□□□□ -2.43
SMC4-205ENST00000465563 SDF2Q99470 211 aa-0.15□□□□□ -2.43
SMC4-205ENST00000465563 WFDC6Q9BQY6 131 aa-0.15□□□□□ -2.43
SMC4-205ENST00000465563 IFT172Q9UG01 1749 aa-0.16□□□□□ -2.43
SMC4-205ENST00000465563 PI4KAP42356 2102 aa-0.16□□□□□ -2.43
SMC4-205ENST00000465563 ZMYM4Q5VZL5 1548 aa-0.16□□□□□ -2.43
SMC4-205ENST00000465563 SCIMPQ6UWF3 145 aa-0.16□□□□□ -2.44
SMC4-205ENST00000465563 MAFIPQ8WZ33 124 aa-0.16□□□□□ -2.44
SMC4-205ENST00000465563 RPRMQ9NS64 109 aa-0.16□□□□□ -2.44
SMC4-205ENST00000465563 COPZ2Q9P299 210 aa-0.16□□□□□ -2.44
SMC4-205ENST00000465563 AKAP6Q13023 2319 aa-0.16□□□□□ -2.44
SMC4-205ENST00000465563 DAPK1P53355 1430 aa-0.17□□□□□ -2.44
SMC4-205ENST00000465563 RPS25P62851 125 aaKnown RBP-0.17□□□□□ -2.44
SMC4-205ENST00000465563 LZICQ8WZA0 190 aa-0.17□□□□□ -2.44
SMC4-205ENST00000465563 NWD2Q9ULI1 1742 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 K7ERU9 68 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 RRAS2P62070 204 aaPredicted RBP-0.18□□□□□ -2.44
SMC4-205ENST00000465563 Q5VV11 94 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 TSTD1Q8NFU3 115 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 U3KQA8 63 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 PATJQ8NI35 1801 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 DOCK1Q14185 1865 aa-0.18□□□□□ -2.44
SMC4-205ENST00000465563 MYH7P12883 1935 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 LRRC37A3O60309 1634 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 WNK3Q9BYP7 1800 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 IFNA17P01571 189 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 IL5P05113 134 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 CBLN1P23435 193 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 ZNF818PQ6ZRF7 136 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 FAM213BQ8TBF2 198 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 PSMG3Q9BT73 122 aaPredicted RBP-0.19□□□□□ -2.44
SMC4-205ENST00000465563 ZNF292O60281 2723 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 PRDM2Q13029 1718 aa-0.19□□□□□ -2.44
SMC4-205ENST00000465563 PKDREJQ9NTG1 2253 aa-0.2□□□□□ -2.44
SMC4-205ENST00000465563 MYOM3Q5VTT5 1437 aa-0.2□□□□□ -2.44
SMC4-205ENST00000465563 GCHFRP30047 84 aa-0.2□□□□□ -2.44
SMC4-205ENST00000465563 GUCA1AP43080 201 aaPredicted RBP-0.2□□□□□ -2.44
SMC4-205ENST00000465563 SCP2D1Q9UJQ7 156 aa-0.2□□□□□ -2.44
SMC4-205ENST00000465563 FOCADQ5VW36 1801 aa-0.2□□□□□ -2.44
SMC4-205ENST00000465563 NDUFB6O95139 128 aa-0.21□□□□□ -2.44
SMC4-205ENST00000465563 PIPP12273 146 aaPredicted RBP-0.21□□□□□ -2.44
SMC4-205ENST00000465563 COPZ1P61923 177 aa-0.21□□□□□ -2.44
SMC4-205ENST00000465563 BICRAQ9NZM4 1560 aa-0.21□□□□□ -2.44
SMC4-205ENST00000465563 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
SMC4-205ENST00000465563 NSD1Q96L73 2696 aaPredicted RBP-0.21□□□□□ -2.44
SMC4-205ENST00000465563 TRAV1-2A0A0B4J238 106 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 A6NIN4 97 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 APOC4-APOC2K7ER74 178 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 CCL8P80075 99 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 KRTAP6-1Q3LI64 71 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 RPL7L1Q6DKI1 246 aaKnown RBP-0.22□□□□□ -2.44
SMC4-205ENST00000465563 SSBP3-AS1Q7Z2R9 100 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 SPTSSAQ969W0 71 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 DPH3Q96FX2 82 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 TMEM191AQ9H0A3 160 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 TPT1P8Q9HAU6 139 aa-0.22□□□□□ -2.44
SMC4-205ENST00000465563 KDM3BQ7LBC6 1761 aa-0.22□□□□□ -2.45
SMC4-205ENST00000465563 ANKRD17O75179 2603 aaKnown RBP-0.22□□□□□ -2.45
SMC4-205ENST00000465563 DOCK2Q92608 1830 aa-0.22□□□□□ -2.45
SMC4-205ENST00000465563 TRBV10-3A0A0K0K1G6 114 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 ZNF815PA8K554 130 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 SPTSSBQ8NFR3 76 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 LINC00312Q9Y6C7 94 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 CASKIN1Q8WXD9 1431 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 CSMD3Q7Z407 3707 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 GRIN2AQ12879 1464 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 ZNF518AQ6AHZ1 1483 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 PXDNQ92626 1479 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 IFT140Q96RY7 1462 aa-0.23□□□□□ -2.45
SMC4-205ENST00000465563 BIVM-ERCC5R4GMW8 1640 aa-0.24□□□□□ -2.45
SMC4-205ENST00000465563 SPTBN1Q01082 2364 aaKnown RBP-0.24□□□□□ -2.45
SMC4-205ENST00000465563 UBE2DNLQ8IWF7 75 aa-0.24□□□□□ -2.45
SMC4-205ENST00000465563 KCNRGQ8N5I3 272 aa-0.24□□□□□ -2.45
SMC4-205ENST00000465563 USF3Q68DE3 2245 aa-0.24□□□□□ -2.45
SMC4-205ENST00000465563 CACNA1AO00555 2505 aa-0.24□□□□□ -2.45
SMC4-205ENST00000465563 PHLPP1O60346 1717 aa-0.24□□□□□ -2.45
SMC4-205ENST00000465563 SMCO1Q147U7 214 aa-0.25□□□□□ -2.45
SMC4-205ENST00000465563 S100A7L2Q5SY68 101 aa-0.25□□□□□ -2.45
SMC4-205ENST00000465563 TCEAL4Q96EI5 215 aa-0.25□□□□□ -2.45
SMC4-205ENST00000465563 CYP4F30PQ9H0H9 118 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms