RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FCER1GP30273 86 aa12.16□□□□□ -0.46
EXOSC3-203ENST00000465229 SPATA45Q537H7 98 aa12.16□□□□□ -0.46
EXOSC3-203ENST00000465229 LINC01545Q5VT33 79 aa12.16□□□□□ -0.46
EXOSC3-203ENST00000465229 C14orf178Q8N769 122 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-203ENST00000465229 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
EXOSC3-203ENST00000465229 K7EMI3 77 aa12.15□□□□□ -0.46
EXOSC3-203ENST00000465229 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
EXOSC3-203ENST00000465229 ZMAT4Q9H898 229 aa12.15□□□□□ -0.46
EXOSC3-203ENST00000465229 STAB2Q8WWQ8 2551 aa12.15□□□□□ -0.46
EXOSC3-203ENST00000465229 MIFP14174 115 aa12.15□□□□□ -0.47
EXOSC3-203ENST00000465229 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.47
EXOSC3-203ENST00000465229 MDFICQ9P1T7 246 aa12.15□□□□□ -0.47
EXOSC3-203ENST00000465229 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
EXOSC3-203ENST00000465229 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
EXOSC3-203ENST00000465229 LINC00315P59091 139 aa12.14□□□□□ -0.47
EXOSC3-203ENST00000465229 Q8NAQ8 132 aa12.14□□□□□ -0.47
EXOSC3-203ENST00000465229 TMEM263Q8WUH6 116 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-203ENST00000465229 IGHV4-28A0A0C4DH34 117 aa12.13□□□□□ -0.47
EXOSC3-203ENST00000465229 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
EXOSC3-203ENST00000465229 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-203ENST00000465229 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
EXOSC3-203ENST00000465229 C11orf72Q8NBR9 251 aa12.13□□□□□ -0.47
EXOSC3-203ENST00000465229 RASL10AQ92737 203 aa12.13□□□□□ -0.47
EXOSC3-203ENST00000465229 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 LAGE3Q14657 143 aa12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 LGALS9BQ3B8N2 356 aa12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 LGALS9CQ6DKI2 356 aa12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 SMIM2Q9BVW6 85 aa12.12□□□□□ -0.47
EXOSC3-203ENST00000465229 DEFB4AO15263 64 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 IFI27L1Q96BM0 104 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 UQCR10Q9UDW1 63 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 MGPP08493 103 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 EMP1P54849 157 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 PTH2Q96A98 100 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
EXOSC3-203ENST00000465229 ZNF415Q09FC8 603 aa12.1□□□□□ -0.47
EXOSC3-203ENST00000465229 ORMDL2Q53FV1 153 aa12.09□□□□□ -0.47
EXOSC3-203ENST00000465229 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
EXOSC3-203ENST00000465229 HSBP1L1C9JCN9 74 aa12.08□□□□□ -0.48
EXOSC3-203ENST00000465229 DAZ2Q13117 558 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-203ENST00000465229 NOP10Q9NPE3 64 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-203ENST00000465229 TGP01266 2768 aa12.08□□□□□ -0.48
EXOSC3-203ENST00000465229 ATP5LO75964 103 aa12.08□□□□□ -0.48
EXOSC3-203ENST00000465229 MAJINQ3KP22 176 aa12.08□□□□□ -0.48
EXOSC3-203ENST00000465229 TRBV6-5A0A0K0K1A5 114 aa12.07□□□□□ -0.48
EXOSC3-203ENST00000465229 SUMO4Q6EEV6 95 aa12.07□□□□□ -0.48
EXOSC3-203ENST00000465229 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
EXOSC3-203ENST00000465229 SPXQ9BT56 116 aa12.07□□□□□ -0.48
EXOSC3-203ENST00000465229 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
EXOSC3-203ENST00000465229 A0A0J9YWU9 116 aa12.06□□□□□ -0.48
EXOSC3-203ENST00000465229 CRYGDP07320 174 aa12.06□□□□□ -0.48
EXOSC3-203ENST00000465229 ZNF876PQ49A33 203 aa12.06□□□□□ -0.48
EXOSC3-203ENST00000465229 JPT2Q9H910 190 aa12.06□□□□□ -0.48
EXOSC3-203ENST00000465229 H0Y8G0 127 aa12.05□□□□□ -0.48
EXOSC3-203ENST00000465229 EDA2RQ9HAV5 297 aa12.05□□□□□ -0.48
EXOSC3-203ENST00000465229 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
EXOSC3-203ENST00000465229 A0A087WWL8 130 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 LINC01549A6NIU2 74 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 M0R143 59 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 M0R2P5 195 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 TCAPO15273 167 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 G0S2P27469 103 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 POLR2KP53803 58 aaKnown RBP12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 FAM222AQ5U5X8 452 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 NUDT3O95989 172 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 Q6ZTI0 123 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 C2orf88Q9BSF0 95 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
EXOSC3-203ENST00000465229 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
EXOSC3-203ENST00000465229 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
EXOSC3-203ENST00000465229 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
EXOSC3-203ENST00000465229 TRGV1A0A0A0MS02 117 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 A8MWV9 139 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 F5H697 171 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 M0QY20 66 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 VCYO14598 125 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 Q6ZN92 141 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.49
EXOSC3-203ENST00000465229 TRBV27A0A0K0K1C4 114 aa12.01□□□□□ -0.49
EXOSC3-203ENST00000465229 LINC00612Q8N6U2 182 aa12.01□□□□□ -0.49
EXOSC3-203ENST00000465229 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
EXOSC3-203ENST00000465229 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
EXOSC3-203ENST00000465229 GAGE12BA1L429 117 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 GAGE7O76087 117 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 GAGE12FP0CL80 117 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 GAGE12GP0CL81 117 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 GAGE12IP0CL82 117 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 DEFB130BP0DP73 79 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 DEFB130AP0DP74 79 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 HNRNPA3P51991 378 aaKnown RBP12□□□□□ -0.49
EXOSC3-203ENST00000465229 ODF1Q14990 250 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 601 ms