RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CEP250Q9BV73 2442 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 KALRNO60229 2985 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 MUC3AQ02505 3323 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 TRAV12-3A0A0B4J271 114 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 B5MCH6 92 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 CRLF1O75462 422 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 IGHV4-39P01824 125 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 IGHG2P01859 326 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 PF4V1P10720 104 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 TTC32Q5I0X7 151 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 DEFB121Q5J5C9 76 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 FAM74A4Q5TZK3 123 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 KRTAP1-3Q8IUG1 177 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 DCANP1Q8TF63 244 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 DEFB104AQ8WTQ1 72 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 ICOSQ9Y6W8 199 aa5.4□□□□□ -1.54
USP48-206ENST00000464577 ANKHD1Q8IWZ3 2542 aaKnown RBP5.4□□□□□ -1.55
USP48-206ENST00000464577 MRPS36P82909 103 aaKnown RBP5.39□□□□□ -1.55
USP48-206ENST00000464577 C15orf53Q8NAA6 179 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 DMXL2Q8TDJ6 3036 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 TPRP12270 2363 aaKnown RBP5.39□□□□□ -1.55
USP48-206ENST00000464577 BOD1L1Q8NFC6 3051 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 PIEZO2Q9H5I5 2752 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 IGHV1OR15-1A0A075B7D0 117 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 TEX49A0A1B0GTD5 131 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 IGHV3-11P01762 117 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 COX6CP09669 75 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 MIAQ16674 131 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 YAE1D1Q9NRH1 226 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 CNOT1A5YKK6 2376 aaKnown RBP5.39□□□□□ -1.55
USP48-206ENST00000464577 WNK2Q9Y3S1 2297 aa5.39□□□□□ -1.55
USP48-206ENST00000464577 CACNA1HO95180 2353 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 IGKV3-7A0A075B6H7 116 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 IGHV3-64A0A075B6Q5 118 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 H7C423 109 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 TIMM17BO60830 172 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 IGLV1-40P01703 118 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 RNF152Q8N8N0 203 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 BPESC1Q9GZL8 116 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 A0A1W2PPR1 153 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 A6NDX4 124 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 LST1O00453 97 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 CD28P10747 220 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
USP48-206ENST00000464577 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 ZNF580Q9UK33 172 aa5.38□□□□□ -1.55
USP48-206ENST00000464577 ANKRD11Q6UB99 2663 aaPredicted RBP5.37□□□□□ -1.55
USP48-206ENST00000464577 TRGV11A0A075B6L2 103 aa5.37□□□□□ -1.55
USP48-206ENST00000464577 TRBV7-7A0A0K0K1E9 115 aa5.37□□□□□ -1.55
USP48-206ENST00000464577 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
USP48-206ENST00000464577 CFHR3Q02985 330 aa5.37□□□□□ -1.55
USP48-206ENST00000464577 FAM104AQ969W3 186 aa5.37□□□□□ -1.55
USP48-206ENST00000464577 MAP1BP46821 2468 aaKnown RBP5.37□□□□□ -1.55
USP48-206ENST00000464577 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 TMEM61Q8N0U2 210 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 VSIG2Q96IQ7 327 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 FAM110AQ9BQ89 295 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 SPXQ9BT56 116 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 ADGRG4Q8IZF6 3080 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 EP300Q09472 2414 aaPredicted RBP5.36□□□□□ -1.55
USP48-206ENST00000464577 ABCA4P78363 2273 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 SNRPD3P62318 126 aaKnown RBP5.36□□□□□ -1.55
USP48-206ENST00000464577 UBTD1Q9HAC8 227 aa5.36□□□□□ -1.55
USP48-206ENST00000464577 TRAV12-2A0A075B6T6 113 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 IGHV3OR16-10A0A075B7F0 116 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 ADARB2-AS1A8MUL3 147 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 K7EQG2 157 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 PRSS2P07478 247 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 EDN2P20800 178 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 KLRB1Q12918 225 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 MGAQ8IWI9 3026 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 ASPMQ8IZT6 3477 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 ACACAQ13085 2346 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 TRAV8-3A0A0A6YYJ7 113 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 ACYP1P07311 99 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 PIK3CD-AS1Q5SR53 167 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 BRD3OSQ6XYD6 125 aa5.35□□□□□ -1.55
USP48-206ENST00000464577 H3BUX3 64 aa5.34□□□□□ -1.55
USP48-206ENST00000464577 NDUFA1O15239 70 aa5.34□□□□□ -1.55
USP48-206ENST00000464577 LY6EQ16553 131 aa5.34□□□□□ -1.55
USP48-206ENST00000464577 CLEC2BQ92478 149 aa5.34□□□□□ -1.55
USP48-206ENST00000464577 IMUPQ9GZP8 106 aa5.34□□□□□ -1.55
USP48-206ENST00000464577 BSNQ9UPA5 3926 aa5.34□□□□□ -1.55
USP48-206ENST00000464577 AKAP13Q12802 2813 aa5.34□□□□□ -1.56
USP48-206ENST00000464577 TACC2O95359 2948 aa5.34□□□□□ -1.56
USP48-206ENST00000464577 DCHS1Q96JQ0 3298 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 SPINK13Q1W4C9 94 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 C4orf48Q5BLP8 95 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 CHCHD7Q9BUK0 85 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 UBE2D4Q9Y2X8 147 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 TNFRSF18Q9Y5U5 241 aa5.33□□□□□ -1.56
USP48-206ENST00000464577 TMEM89A2RUT3 159 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms