RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 DPH3Q96FX2 82 aa8.78□□□□□ -1
RBM39-223ENST00000463004 ZNF561-AS1K7EIQ3 104 aa8.78□□□□□ -1
RBM39-223ENST00000463004 SPRY2O43597 315 aa8.78□□□□□ -1
RBM39-223ENST00000463004 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
RBM39-223ENST00000463004 COL27A1Q8IZC6 1860 aaPredicted RBP8.77□□□□□ -1.01
RBM39-223ENST00000463004 CLUHP3Q96NS8 147 aa8.77□□□□□ -1.01
RBM39-223ENST00000463004 DLEU1O43261 78 aa8.77□□□□□ -1.01
RBM39-223ENST00000463004 DEFB125Q8N687 156 aa8.77□□□□□ -1.01
RBM39-223ENST00000463004 MYO18BQ8IUG5 2567 aa8.77□□□□□ -1.01
RBM39-223ENST00000463004 PSCAO43653 123 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 IFITM1P13164 125 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 DEFB1P60022 68 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 ANGP03950 147 aaKnown RBP8.76□□□□□ -1.01
RBM39-223ENST00000463004 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 PKD1L2Q7Z442 2459 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 DKK2Q9UBU2 259 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 TRANK1O15050 2925 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 RS1O15537 224 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 SLC25A29Q8N8R3 303 aa8.76□□□□□ -1.01
RBM39-223ENST00000463004 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 CCL18P55774 89 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 C9orf85Q96MD7 179 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 TRBV20-1A0A075B6N2 111 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 FSHBP01225 129 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 JPT2Q9H910 190 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
RBM39-223ENST00000463004 IGLV1-51P01701 117 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 FGF6P10767 208 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 NUPR1O60356 82 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 GDF5OSQ5U4N7 250 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 UTRNP46939 3433 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 CST9LQ9H4G1 147 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 ZNF462Q96JM2 2506 aa8.74□□□□□ -1.01
RBM39-223ENST00000463004 CXCL5P42830 114 aa8.73□□□□□ -1.01
RBM39-223ENST00000463004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
RBM39-223ENST00000463004 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
RBM39-223ENST00000463004 LINC00467Q9BRT7 94 aa8.73□□□□□ -1.01
RBM39-223ENST00000463004 SOCS3O14543 225 aa8.73□□□□□ -1.01
RBM39-223ENST00000463004 DEFB104AQ8WTQ1 72 aa8.73□□□□□ -1.01
RBM39-223ENST00000463004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.73□□□□□ -1.01
RBM39-223ENST00000463004 PTH2Q96A98 100 aa8.73□□□□□ -1.01
RBM39-223ENST00000463004 SPATA25Q9BR10 227 aa8.73□□□□□ -1.01
RBM39-223ENST00000463004 BAALCQ8WXS3 180 aa8.72□□□□□ -1.01
RBM39-223ENST00000463004 CEP350Q5VT06 3117 aa8.72□□□□□ -1.01
RBM39-223ENST00000463004 E9PLD3 99 aa8.72□□□□□ -1.01
RBM39-223ENST00000463004 TRAV13-2A0A0B4J235 113 aa8.72□□□□□ -1.01
RBM39-223ENST00000463004 A0A0J9YY99 117 aa8.71□□□□□ -1.01
RBM39-223ENST00000463004 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.01
RBM39-223ENST00000463004 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.01
RBM39-223ENST00000463004 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.01
RBM39-223ENST00000463004 ODF1Q14990 250 aa8.71□□□□□ -1.01
RBM39-223ENST00000463004 CEND1Q8N111 149 aa8.71□□□□□ -1.01
RBM39-223ENST00000463004 M0QY20 66 aa8.71□□□□□ -1.02
RBM39-223ENST00000463004 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
RBM39-223ENST00000463004 C1orf43Q9BWL3 253 aa8.71□□□□□ -1.02
RBM39-223ENST00000463004 COX11Q9Y6N1 276 aa8.71□□□□□ -1.02
RBM39-223ENST00000463004 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
RBM39-223ENST00000463004 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 CFAP126Q5VTH2 177 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 Q6ZTI0 123 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 TP53TG3Q9ULZ0 132 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 PROK1P58294 105 aa8.7□□□□□ -1.02
RBM39-223ENST00000463004 COX7A2LO14548 114 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 EREGO14944 169 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 A0A0J9YXV3 536 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 C9orf118A6NHY6 69 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 TM2D2Q9BX73 214 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 PRO1854Q9UHT4 67 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 BVES-AS1Q5T3Y7 98 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 C18orf65Q6ZTR6 163 aa8.69□□□□□ -1.02
RBM39-223ENST00000463004 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 FAM222AQ5U5X8 452 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 VSIG2Q96IQ7 327 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 SPINK8P0C7L1 97 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 C11orf21Q9P2W6 132 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 MYO9AB2RTY4 2548 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
RBM39-223ENST00000463004 PRR9Q5T870 116 aa8.67□□□□□ -1.02
RBM39-223ENST00000463004 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
RBM39-223ENST00000463004 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
RBM39-223ENST00000463004 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
RBM39-223ENST00000463004 GTSF1LQ9H1H1 148 aa8.67□□□□□ -1.02
RBM39-223ENST00000463004 C11orf68Q9H3H3 251 aaKnown RBP8.67□□□□□ -1.02
RBM39-223ENST00000463004 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
RBM39-223ENST00000463004 C10orf126Q8N4M7 172 aa8.66□□□□□ -1.02
RBM39-223ENST00000463004 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
RBM39-223ENST00000463004 LRRK2Q5S007 2527 aa8.66□□□□□ -1.02
RBM39-223ENST00000463004 USP9YO00507 2555 aaPredicted RBP8.66□□□□□ -1.02
RBM39-223ENST00000463004 NXPH4O95158 308 aa8.66□□□□□ -1.02
RBM39-223ENST00000463004 LINC00482Q8N8I6 264 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms