RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 A0A087WW49 117 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 TRAV5A0A0B4J249 113 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 TEX50A0A1B0GTY4 177 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 A0A1B0GWB2 263 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 M0R2P5 195 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 DUSP14O95147 198 aaKnown RBP3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 NDUFA3O95167 84 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 NDUFA7O95182 113 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 IGKV1-5P01602 117 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM258P61165 79 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 HBG1P69891 147 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 HBG2P69892 147 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 WFDC2Q14508 124 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 RTL8BQ17RB0 113 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 DEFB136Q30KP8 78 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 NSUN5P1Q3KNT7 163 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 NMSQ5H8A3 153 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 TEN1Q86WV5 123 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 PDPNQ86YL7 162 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 SBSPONQ8IVN8 264 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 Q8N2B8 174 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 C3orf56Q8N813 242 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 NUP35Q8NFH5 326 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 OR2T6Q8NHC8 308 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 KIR2DL4Q99706 377 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 C16orf95Q9H693 158 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 OSTCQ9NRP0 149 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 PRNDQ9UKY0 176 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 KLF12Q9Y4X4 402 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 RYR1P21817 5038 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 C3orf85A0A1B0GTC6 90 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 FAM24AA6NFZ4 105 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 C15orf61A6NNL5 157 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 UPK2O00526 184 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 LEPROTL1O95214 131 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 IGHV3-11P01762 117 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 IGHG2P01859 326 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC00694P0DN24 101 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 RIGQ13278 110 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 FXYD3Q14802 87 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 CFAP126Q5VTH2 177 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 LYZL2Q7Z4W2 148 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 ATP5L2Q7Z4Y8 100 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 OR1L4Q8NGR5 311 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 OR1L8Q8NGR8 309 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 ARPC1AQ92747 370 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 C11orf52Q96A22 123 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 PLEKHB2Q96CS7 222 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC00479Q96M42 142 aa3.59□□□□□ -1.83
ATPAF1-203ENST00000460928 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 TRAV41A0A0B4J266 112 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 TRBV7-7A0A0K0K1E9 115 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 IZUMO1RA6ND01 250 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 IGLL5B9A064 214 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 C11orf94C9JXX5 98 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 F2Z2F3 143 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 IGLV2-11P01706 119 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 TRBV12-3P01733 135 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 IGHV3-23P01764 117 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 NMUP48645 174 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 MFAP2P55001 183 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 VMA21Q3ZAQ7 101 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 LCN12Q6JVE5 192 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 C3orf22Q8N5N4 141 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 TMEM167AQ8TBQ9 72 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 BAALCQ8WXS3 180 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 DLX4Q92988 240 aaPredicted RBP3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 TMEM222Q9H0R3 208 aa3.58□□□□□ -1.84
ATPAF1-203ENST00000460928 TCRBV4S1A1TA0A5B7 111 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 ATP5LO75964 103 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 P0C879 139 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 CRYGAP11844 174 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 RPL27AP46776 148 aaKnown RBP3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 WT1-ASQ06250 92 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 RRN3P1Q2M238 152 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 LGALS9BQ3B8N2 356 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 C9orf153Q5TBE3 101 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 LGALS9CQ6DKI2 356 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 SH2D6Q7Z4S9 175 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 SORL1Q92673 2214 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 PLEKHA3Q9HB20 300 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 ZNF331Q9NQX6 463 aaPredicted RBP3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 ZNF355PQ9NSJ1 428 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 CACNG5Q9UF02 275 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 TP53TG1Q9Y2A0 90 aa3.57□□□□□ -1.84
ATPAF1-203ENST00000460928 SMIM27A0A1W2PRY6 76 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 NDUFC2-KCTD14E9PQ53 114 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 OVOL1O14753 267 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 DPM2O94777 84 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 TRGV3P03979 118 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 IGF1P05019 195 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 IGLC6P0CF74 106 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 ERVK-16P61578 105 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 HERVK_113P63121 156 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms