RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
SDF4-204ENST00000459994 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
SDF4-204ENST00000459994 RNF185Q96GF1 192 aa10.84□□□□□ -0.67
SDF4-204ENST00000459994 GNB1LQ9BYB4 327 aa10.84□□□□□ -0.67
SDF4-204ENST00000459994 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
SDF4-204ENST00000459994 HHLA3Q9XRX5 114 aa10.84□□□□□ -0.67
SDF4-204ENST00000459994 F5H697 171 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 MT-ND6P03923 174 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 MGPP08493 103 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 ZNF56Q15929 161 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 Q6ZR54 194 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 Q6ZSN1 163 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 AMN1Q8IY45 258 aa10.83□□□□□ -0.68
SDF4-204ENST00000459994 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.68
SDF4-204ENST00000459994 KIAA1109Q2LD37 5005 aa10.82□□□□□ -0.68
SDF4-204ENST00000459994 COLCA2A8K830 154 aa10.82□□□□□ -0.68
SDF4-204ENST00000459994 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
SDF4-204ENST00000459994 CRYBA4P53673 196 aa10.82□□□□□ -0.68
SDF4-204ENST00000459994 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
SDF4-204ENST00000459994 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
SDF4-204ENST00000459994 H7C1H1 209 aa10.81□□□□□ -0.68
SDF4-204ENST00000459994 M0QY20 66 aa10.81□□□□□ -0.68
SDF4-204ENST00000459994 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
SDF4-204ENST00000459994 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
SDF4-204ENST00000459994 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 PRSS29PA6NIE9 313 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 H3BNG1 76 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 K7EQD1 137 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 PAX4O43316 350 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 RHOHQ15669 191 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 MRPL51Q4U2R6 128 aaKnown RBP10.8□□□□□ -0.68
SDF4-204ENST00000459994 VSIG2Q96IQ7 327 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
SDF4-204ENST00000459994 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
SDF4-204ENST00000459994 NUDT3O95989 172 aa10.79□□□□□ -0.68
SDF4-204ENST00000459994 PPBPP02775 128 aa10.79□□□□□ -0.68
SDF4-204ENST00000459994 LINC00336Q6ZUF6 198 aa10.79□□□□□ -0.68
SDF4-204ENST00000459994 C15orf53Q8NAA6 179 aa10.79□□□□□ -0.68
SDF4-204ENST00000459994 APCSP02743 223 aa10.78□□□□□ -0.68
SDF4-204ENST00000459994 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
SDF4-204ENST00000459994 TRAV26-2A0A0B4J265 109 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 PPP1R17O96001 155 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 RAB5AP20339 215 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 CKS2P33552 79 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 DNAJC30Q96LL9 226 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 MRPL18Q9H0U6 180 aaKnown RBP10.77□□□□□ -0.69
SDF4-204ENST00000459994 NIT2Q9NQR4 276 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 LINC00588Q9Y4M8 146 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 DNAH11Q96DT5 4516 aa10.77□□□□□ -0.69
SDF4-204ENST00000459994 A0A0J9YY99 117 aa10.76□□□□□ -0.69
SDF4-204ENST00000459994 GYPEP15421 78 aa10.76□□□□□ -0.69
SDF4-204ENST00000459994 FABP9Q0Z7S8 132 aa10.76□□□□□ -0.69
SDF4-204ENST00000459994 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
SDF4-204ENST00000459994 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
SDF4-204ENST00000459994 TRBV6-5A0A0K0K1A5 114 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 D6R8Y8 96 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 PHOX2AO14813 284 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 GAS8-AS1O95177 125 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 RPS10P46783 165 aaKnown RBP10.75□□□□□ -0.69
SDF4-204ENST00000459994 RPL36AP83881 106 aaKnown RBP10.75□□□□□ -0.69
SDF4-204ENST00000459994 NRACQ8N912 160 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 RPL36ALQ969Q0 106 aaKnown RBP10.75□□□□□ -0.69
SDF4-204ENST00000459994 Q9UF83 564 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
SDF4-204ENST00000459994 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 NCR2O95944 276 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 LINC00694P0DN24 101 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
SDF4-204ENST00000459994 OR10J3Q5JRS4 329 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
SDF4-204ENST00000459994 PRELID3AQ96N28 172 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 TNFRSF18Q9Y5U5 241 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
SDF4-204ENST00000459994 GAGE12JA6NER3 117 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 UBE2D3P61077 147 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 UBE2D2P62837 147 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 GAGE1Q13065 139 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 GAGE4Q13068 117 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 GAGE5Q13069 117 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 GAGE13Q4V321 117 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 SH2D6Q7Z4S9 175 aa10.73□□□□□ -0.69
SDF4-204ENST00000459994 A0A096LPF7 62 aa10.72□□□□□ -0.69
SDF4-204ENST00000459994 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
SDF4-204ENST00000459994 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
SDF4-204ENST00000459994 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
SDF4-204ENST00000459994 ALKBH7Q9BT30 221 aaPredicted RBP10.72□□□□□ -0.69
SDF4-204ENST00000459994 ST20Q9HBF5 79 aa10.72□□□□□ -0.69
SDF4-204ENST00000459994 NPYP01303 97 aa10.71□□□□□ -0.69
SDF4-204ENST00000459994 SRIP30626 198 aa10.71□□□□□ -0.69
SDF4-204ENST00000459994 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
SDF4-204ENST00000459994 KRTAP1-5Q9BYS1 174 aa10.71□□□□□ -0.69
SDF4-204ENST00000459994 NBDYA0A0U1RRE5 68 aa10.7□□□□□ -0.7
SDF4-204ENST00000459994 PRSS47A8MTI9 375 aa10.7□□□□□ -0.7
SDF4-204ENST00000459994 TRGC2P03986 189 aa10.7□□□□□ -0.7
SDF4-204ENST00000459994 POLR2KP53803 58 aaKnown RBP10.7□□□□□ -0.7
SDF4-204ENST00000459994 SUMO2P61956 95 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms