RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 DOCK11Q5JSL3 2073 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 WI2-2373I1.2A0A1W2PRP0 233 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 I3L2K1 104 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 LECT2O14960 151 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 Q6ZR03 302 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 ZNF503Q96F45 646 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 CADP27708 2225 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 UBE2E2Q96LR5 201 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 NCKAP5O14513 1909 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 PRB4P10163 310 aaPredicted RBP7.53□□□□□ -1.2
UFD1-205ENST00000459854 GATA1P15976 413 aaPredicted RBP7.53□□□□□ -1.2
UFD1-205ENST00000459854 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
UFD1-205ENST00000459854 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 F5H768 121 aa7.53□□□□□ -1.2
UFD1-205ENST00000459854 SHANK1Q9Y566 2161 aa7.52□□□□□ -1.2
UFD1-205ENST00000459854 NPBQ8NG41 125 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 HIVEP3Q5T1R4 2406 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 ELANEP08246 267 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 DAND5Q8N907 189 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 MRPL36Q9P0J6 103 aaKnown RBP7.52□□□□□ -1.21
UFD1-205ENST00000459854 RTTNQ86VV8 2226 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 CFAP126Q5VTH2 177 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 MBD6Q96DN6 1003 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
UFD1-205ENST00000459854 USP24Q9UPU5 2620 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 SMIM9A6NGZ8 99 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 COL8A2P25067 703 aa7.52□□□□□ -1.21
UFD1-205ENST00000459854 C22orf34Q6ZV56 151 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 C17orf77Q96MU5 243 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 BPESC1Q9GZL8 116 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 WDFY4Q6ZS81 3184 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 IGHV3-16A0A0C4DH30 117 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 C3orf56Q8N813 242 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 GNRH2O43555 120 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 TIMM17BO60830 172 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 C20orf203Q8NBC4 194 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
UFD1-205ENST00000459854 PSCAO43653 123 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 Q96MF0 132 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 U3KQK5 164 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 AKAP13Q12802 2813 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 VPS13AQ96RL7 3174 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 USF3Q68DE3 2245 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 ETDCA0A1B0GVM5 59 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 DEFB130BP0DP73 79 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 DEFB130AP0DP74 79 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 RPL35AP18077 110 aaKnown RBP7.5□□□□□ -1.21
UFD1-205ENST00000459854 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 DIRC1Q969H9 104 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 TPSG1Q9NRR2 321 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
UFD1-205ENST00000459854 TEX49A0A1B0GTD5 131 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
UFD1-205ENST00000459854 LY6HO94772 140 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 FGF23Q9GZV9 251 aaPredicted RBP7.5□□□□□ -1.21
UFD1-205ENST00000459854 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
UFD1-205ENST00000459854 IGLV11-55A0A075B6I3 123 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 K7EQD1 137 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 IGKV1-17P01599 117 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 NEXN-AS1Q8NBZ9 246 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 PSMG3-AS1Q96PY0 264 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 IGLV2-8P01709 118 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 FAM222AQ5U5X8 452 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 TRAV23DV6A0A075B6W5 121 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 APOC4P55056 127 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 LINC01356Q8N9X3 169 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 ARHGAP21Q5T5U3 1957 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 J3QLI3 93 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 K7EIM0 57 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 P0C879 139 aa7.49□□□□□ -1.21
UFD1-205ENST00000459854 RNF223E7ERA6 249 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 SEC61GP60059 68 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 UBE2DNLQ8IWF7 75 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 MSRB1Q9NZV6 116 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 AKAP6Q13023 2319 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 NDUFS5O43920 106 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 ANGP03950 147 aaKnown RBP7.48□□□□□ -1.21
UFD1-205ENST00000459854 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 MLST8Q9BVC4 326 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 CACNA1DQ01668 2161 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 C14orf132Q9NPU4 83 aa7.48□□□□□ -1.21
UFD1-205ENST00000459854 BPY2O14599 106 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 Q6JHZ5 121 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 UFSP1Q6NVU6 142 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 PRR15LQ9BU68 103 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 TRAV12-2A0A075B6T6 113 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 A0A0J9YY99 117 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 BLCAPP62952 87 aa7.47□□□□□ -1.21
UFD1-205ENST00000459854 NRGNQ92686 78 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms