RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 GAGE5Q13069 117 aa7.46□□□□□ -1.21
SYPL1-202ENST00000455385 GAGE13Q4V321 117 aa7.46□□□□□ -1.21
SYPL1-202ENST00000455385 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
SYPL1-202ENST00000455385 NUDT3O95989 172 aa7.46□□□□□ -1.22
SYPL1-202ENST00000455385 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
SYPL1-202ENST00000455385 CASC10Q5T4H9 136 aa7.46□□□□□ -1.22
SYPL1-202ENST00000455385 ZNRF2Q8NHG8 242 aa7.46□□□□□ -1.22
SYPL1-202ENST00000455385 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
SYPL1-202ENST00000455385 PLECQ15149 4684 aaKnown RBP7.45□□□□□ -1.22
SYPL1-202ENST00000455385 D6R8Y8 96 aa7.45□□□□□ -1.22
SYPL1-202ENST00000455385 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
SYPL1-202ENST00000455385 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
SYPL1-202ENST00000455385 NRACQ8N912 160 aa7.45□□□□□ -1.22
SYPL1-202ENST00000455385 FRZBQ92765 325 aa7.45□□□□□ -1.22
SYPL1-202ENST00000455385 NIT2Q9NQR4 276 aa7.45□□□□□ -1.22
SYPL1-202ENST00000455385 KLK5Q9Y337 293 aaPredicted RBP7.45□□□□□ -1.22
SYPL1-202ENST00000455385 CKS2P33552 79 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 COX19Q49B96 90 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
SYPL1-202ENST00000455385 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 C3orf84H3BNL1 204 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 H7C1H1 209 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 APCSP02743 223 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
SYPL1-202ENST00000455385 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 ICOSQ9Y6W8 199 aa7.44□□□□□ -1.22
SYPL1-202ENST00000455385 UBE2D3P61077 147 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 UBE2D2P62837 147 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
SYPL1-202ENST00000455385 FABP9Q0Z7S8 132 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 C15orf53Q8NAA6 179 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
SYPL1-202ENST00000455385 TNFRSF18Q9Y5U5 241 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 NPYP01303 97 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 MT-ND6P03923 174 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 RAB5AP20339 215 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 OR10J3Q5JRS4 329 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 DEFB104AQ8WTQ1 72 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
SYPL1-202ENST00000455385 IGHV3-38A0A0C4DH36 116 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 TRBV6-5A0A0K0K1A5 114 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 PPBPP02775 128 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 SRIP30626 198 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 ESRGQ1W209 222 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 NEGR1Q7Z3B1 354 aa7.42□□□□□ -1.22
SYPL1-202ENST00000455385 SDHAF1A6NFY7 115 aa7.41□□□□□ -1.22
SYPL1-202ENST00000455385 TRGC2P03986 189 aa7.41□□□□□ -1.22
SYPL1-202ENST00000455385 POLR2KP53803 58 aaKnown RBP7.41□□□□□ -1.22
SYPL1-202ENST00000455385 ALKBH7Q9BT30 221 aaPredicted RBP7.41□□□□□ -1.22
SYPL1-202ENST00000455385 TMEM70Q9BUB7 260 aa7.41□□□□□ -1.22
SYPL1-202ENST00000455385 PHOX2AO14813 284 aa7.4□□□□□ -1.22
SYPL1-202ENST00000455385 TCTAP57738 103 aa7.4□□□□□ -1.22
SYPL1-202ENST00000455385 ST20Q9HBF5 79 aa7.4□□□□□ -1.22
SYPL1-202ENST00000455385 SUMO2P61956 95 aaKnown RBP7.4□□□□□ -1.23
SYPL1-202ENST00000455385 NTM-AS1Q6ZSK4 140 aa7.4□□□□□ -1.23
SYPL1-202ENST00000455385 PPP1R17O96001 155 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 SH2D6Q7Z4S9 175 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 C20orf78Q9BR46 151 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 GTSF1LQ9H1H1 148 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 LYSTQ99698 3801 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
SYPL1-202ENST00000455385 DAZ4Q86SG3 579 aaKnown RBP7.39□□□□□ -1.23
SYPL1-202ENST00000455385 DAZ3Q9NR90 486 aaKnown RBP7.39□□□□□ -1.23
SYPL1-202ENST00000455385 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
SYPL1-202ENST00000455385 TRBV27A0A0K0K1C4 114 aa7.38□□□□□ -1.23
SYPL1-202ENST00000455385 LOC389332A0A1B0GUA5 103 aa7.38□□□□□ -1.23
SYPL1-202ENST00000455385 LAMTOR2Q9Y2Q5 125 aa7.38□□□□□ -1.23
SYPL1-202ENST00000455385 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.37□□□□□ -1.23
SYPL1-202ENST00000455385 I3L3M4 83 aa7.37□□□□□ -1.23
SYPL1-202ENST00000455385 VCYO14598 125 aa7.37□□□□□ -1.23
SYPL1-202ENST00000455385 TSHBP01222 138 aa7.37□□□□□ -1.23
SYPL1-202ENST00000455385 PMCHP20382 165 aa7.37□□□□□ -1.23
SYPL1-202ENST00000455385 TIRAPP58753 221 aa7.37□□□□□ -1.23
SYPL1-202ENST00000455385 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
SYPL1-202ENST00000455385 SMIM2Q9BVW6 85 aa7.37□□□□□ -1.23
SYPL1-202ENST00000455385 IQCJQ1A5X6 159 aa7.36□□□□□ -1.23
SYPL1-202ENST00000455385 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
SYPL1-202ENST00000455385 IFI27P40305 119 aaPredicted RBP7.36□□□□□ -1.23
SYPL1-202ENST00000455385 CCL18P55774 89 aa7.36□□□□□ -1.23
SYPL1-202ENST00000455385 LELP1Q5T871 98 aa7.36□□□□□ -1.23
SYPL1-202ENST00000455385 C18orf32Q8TCD1 76 aa7.36□□□□□ -1.23
SYPL1-202ENST00000455385 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
SYPL1-202ENST00000455385 TCAPO15273 167 aa7.35□□□□□ -1.23
SYPL1-202ENST00000455385 COTL1Q14019 142 aa7.35□□□□□ -1.23
SYPL1-202ENST00000455385 Q8N8P6 123 aa7.35□□□□□ -1.23
SYPL1-202ENST00000455385 MRPS16Q9Y3D3 137 aaKnown RBP7.35□□□□□ -1.23
SYPL1-202ENST00000455385 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.23
SYPL1-202ENST00000455385 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
SYPL1-202ENST00000455385 CHCHD7Q9BUK0 85 aa7.34□□□□□ -1.23
SYPL1-202ENST00000455385 VPS13DQ5THJ4 4388 aa7.34□□□□□ -1.23
SYPL1-202ENST00000455385 LGALS9CQ6DKI2 356 aa7.33□□□□□ -1.24
SYPL1-202ENST00000455385 Q8N3U1 123 aa7.33□□□□□ -1.24
SYPL1-202ENST00000455385 KIR2DL4Q99706 377 aa7.33□□□□□ -1.24
SYPL1-202ENST00000455385 IGHV1-24A0A0C4DH33 117 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms