RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TMEM97Q5BJF2 176 aa7.11□□□□□ -1.27
DDX39A-203ENST00000454233 C9orf62Q8N4C0 152 aa7.11□□□□□ -1.27
DDX39A-203ENST00000454233 KLK12Q9UKR0 248 aa7.11□□□□□ -1.27
DDX39A-203ENST00000454233 LRP1BQ9NZR2 4599 aa7.11□□□□□ -1.27
DDX39A-203ENST00000454233 TRBV20OR9-2A0A075B6H5 130 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 F2Z2F3 143 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 H7C1H1 209 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 MGPP08493 103 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 XGP55808 180 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 PKIAP61925 76 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 BLOC1S1P78537 153 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 UBE2WQ96B02 151 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 KIF25-AS1Q9Y6Z4 181 aa7.1□□□□□ -1.27
DDX39A-203ENST00000454233 IGKV2D-24A0A075B6R9 120 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 EPM2AB3EWF7 344 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 TRGC1P0CF51 173 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 Q0VG73 95 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 CHCHD5Q9BSY4 110 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 PCLOQ9Y6V0 5065 aa7.09□□□□□ -1.27
DDX39A-203ENST00000454233 LECT2O14960 151 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 CRPP02741 224 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 WFDC2Q14508 124 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 NUDT10Q8NFP7 164 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 BAALCQ8WXS3 180 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 NUDT11Q96G61 164 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 DNAJC30Q96LL9 226 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 TMEM70Q9BUB7 260 aa7.08□□□□□ -1.28
DDX39A-203ENST00000454233 HSPG2P98160 4391 aa7.07□□□□□ -1.28
DDX39A-203ENST00000454233 TRBV25-1A0A075B6N4 114 aa7.07□□□□□ -1.28
DDX39A-203ENST00000454233 ANGP03950 147 aaKnown RBP7.07□□□□□ -1.28
DDX39A-203ENST00000454233 C15orf54Q8N8G6 183 aa7.07□□□□□ -1.28
DDX39A-203ENST00000454233 Q8N976 141 aa7.07□□□□□ -1.28
DDX39A-203ENST00000454233 FRZBQ92765 325 aa7.07□□□□□ -1.28
DDX39A-203ENST00000454233 C1orf43Q9BWL3 253 aa7.07□□□□□ -1.28
DDX39A-203ENST00000454233 RPP21Q9H633 154 aaKnown RBP7.07□□□□□ -1.28
DDX39A-203ENST00000454233 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.06□□□□□ -1.28
DDX39A-203ENST00000454233 TMEM250H0YL14 139 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 M0QY20 66 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 NTF3P20783 257 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 WDR73Q6P4I2 378 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 RASL11AQ6T310 242 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 ATRAIDQ6UW56 229 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 OCC1Q8TAD7 63 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 DPH3P1Q9H4G8 78 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
DDX39A-203ENST00000454233 IGHV1-24A0A0C4DH33 117 aa7.05□□□□□ -1.28
DDX39A-203ENST00000454233 K7EN84 100 aa7.05□□□□□ -1.28
DDX39A-203ENST00000454233 CTRLP40313 264 aa7.05□□□□□ -1.28
DDX39A-203ENST00000454233 TWIST1Q15672 202 aa7.05□□□□□ -1.28
DDX39A-203ENST00000454233 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
DDX39A-203ENST00000454233 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
DDX39A-203ENST00000454233 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 GATCO43716 136 aaKnown RBP7.04□□□□□ -1.28
DDX39A-203ENST00000454233 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
DDX39A-203ENST00000454233 NKX2-5P52952 324 aaPredicted RBP7.04□□□□□ -1.28
DDX39A-203ENST00000454233 CEBPGP53567 150 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 GAGE6Q13070 117 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 IQCJQ1A5X6 159 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 C14orf177Q52M58 125 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 Q5VSD8 79 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 ENHOQ6UWT2 76 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 SMIM15Q7Z3B0 74 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 LYPD6BQ8NI32 183 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
DDX39A-203ENST00000454233 APOBP04114 4563 aaKnown RBP7.04□□□□□ -1.28
DDX39A-203ENST00000454233 RBX1P62877 108 aa7.03□□□□□ -1.28
DDX39A-203ENST00000454233 HAMPP81172 84 aa7.03□□□□□ -1.28
DDX39A-203ENST00000454233 MIAQ16674 131 aa7.03□□□□□ -1.28
DDX39A-203ENST00000454233 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
DDX39A-203ENST00000454233 EIF5A2Q9GZV4 153 aaKnown RBP7.03□□□□□ -1.28
DDX39A-203ENST00000454233 A8MWL6 223 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 INAFM2P0DMQ5 153 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 PGLYRP4Q96LB8 373 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 TMEM243Q9BU79 118 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 FAM30AQ9NZY2 134 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 ABCA13Q86UQ4 5058 aa7.02□□□□□ -1.29
DDX39A-203ENST00000454233 NDUFS6O75380 124 aaKnown RBP7.01□□□□□ -1.29
DDX39A-203ENST00000454233 HLA-DQA1P01909 254 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 COTL1Q14019 142 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 CLPSL2Q6UWE3 100 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 BORCS7Q96B45 105 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 SMIM7Q9BQ49 75 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
DDX39A-203ENST00000454233 UBE2L6O14933 153 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 AMTP48728 403 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 CT83Q5H943 113 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 TEX261Q6UWH6 196 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 Q6ZSA8 131 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 GATD1Q8NB37 220 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 GTSF1Q8WW33 167 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 FAM210AQ96ND0 272 aa7□□□□□ -1.29
DDX39A-203ENST00000454233 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
DDX39A-203ENST00000454233 A0A1B0GUV1 79 aa6.99□□□□□ -1.29
DDX39A-203ENST00000454233 A0A1B0GVG6 124 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms