RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SNCGO76070 127 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 DEFB113Q30KQ7 82 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 MUC4Q99102 2169 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 FLNAP21333 2647 aaKnown RBP9.04□□□□□ -0.96
COL27A1-202ENST00000451716 IGHV4OR15-8A0A075B7B6 117 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 A0A087WW49 117 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 K7EMT4 169 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 ASIPP42127 132 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 Q6YL49 198 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 C18orf65Q6ZTR6 163 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 LRRC75A-AS1Q8N1F1 130 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 ZNF702PQ9H963 129 aa9.04□□□□□ -0.96
COL27A1-202ENST00000451716 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
COL27A1-202ENST00000451716 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
COL27A1-202ENST00000451716 IGHV4-4A0A075B6R2 117 aa9.03□□□□□ -0.96
COL27A1-202ENST00000451716 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
COL27A1-202ENST00000451716 FCER1GP30273 86 aa9.03□□□□□ -0.96
COL27A1-202ENST00000451716 PHLDA1Q8WV24 401 aaPredicted RBP9.03□□□□□ -0.96
COL27A1-202ENST00000451716 TRAV12-3A0A0B4J271 114 aa9.02□□□□□ -0.96
COL27A1-202ENST00000451716 IGLL5B9A064 214 aa9.02□□□□□ -0.96
COL27A1-202ENST00000451716 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.96
COL27A1-202ENST00000451716 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.96
COL27A1-202ENST00000451716 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.96
COL27A1-202ENST00000451716 Q8N8P6 123 aa9.02□□□□□ -0.96
COL27A1-202ENST00000451716 ZNF580Q9UK33 172 aa9.02□□□□□ -0.96
COL27A1-202ENST00000451716 TRAV12-2A0A075B6T6 113 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 FSHBP01225 129 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 PRSS1P07477 247 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 MGPP08493 103 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
COL27A1-202ENST00000451716 WNK1Q9H4A3 2382 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 K7EMI3 77 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 PRADC1Q9BSG0 188 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 AKAP9Q99996 3911 aa9.02□□□□□ -0.97
COL27A1-202ENST00000451716 CRLF1O75462 422 aa9.01□□□□□ -0.97
COL27A1-202ENST00000451716 HOXD3P31249 432 aaPredicted RBP9.01□□□□□ -0.97
COL27A1-202ENST00000451716 DUX3Q96PT4 197 aa9.01□□□□□ -0.97
COL27A1-202ENST00000451716 JPT2Q9H910 190 aa9.01□□□□□ -0.97
COL27A1-202ENST00000451716 MDFICQ9P1T7 246 aa9.01□□□□□ -0.97
COL27A1-202ENST00000451716 CARD19Q96LW7 228 aa9.01□□□□□ -0.97
COL27A1-202ENST00000451716 LINC01546A6NGU7 62 aa9□□□□□ -0.97
COL27A1-202ENST00000451716 LGALS1P09382 135 aaKnown RBP9□□□□□ -0.97
COL27A1-202ENST00000451716 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
COL27A1-202ENST00000451716 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
COL27A1-202ENST00000451716 MTORP42345 2549 aa9□□□□□ -0.97
COL27A1-202ENST00000451716 KLLNB2CW77 178 aa9□□□□□ -0.97
COL27A1-202ENST00000451716 APRG1Q8IVJ8 170 aa9□□□□□ -0.97
COL27A1-202ENST00000451716 FOXC2Q99958 501 aa9□□□□□ -0.97
COL27A1-202ENST00000451716 TMEM262E9PQX1 116 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 NMUP48645 174 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 SLURP1P55000 103 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 LAGE3Q14657 143 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 CD7P09564 240 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 DPH3P1Q9H4G8 78 aa8.99□□□□□ -0.97
COL27A1-202ENST00000451716 KHDC1LQ5JSQ8 128 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 HRCT1Q6UXD1 115 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 KRTAP1-3Q8IUG1 177 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 TTTY13Q9BZ97 58 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 NIPBLQ6KC79 2804 aaeCLIP8.98□□□□□ -0.97
COL27A1-202ENST00000451716 ELANEP08246 267 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 SNRPD3P62318 126 aaKnown RBP8.98□□□□□ -0.97
COL27A1-202ENST00000451716 SPINK13Q1W4C9 94 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 CFAP126Q5VTH2 177 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 A0A087WWL8 130 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 TMEM89A2RUT3 159 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 K7EQG2 157 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 RS1O15537 224 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 WFDC11Q8NEX6 87 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 UBE2E2Q96LR5 201 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
COL27A1-202ENST00000451716 A0A0J9YX75 114 aa8.97□□□□□ -0.97
COL27A1-202ENST00000451716 SUMO2P61956 95 aaKnown RBP8.97□□□□□ -0.97
COL27A1-202ENST00000451716 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
COL27A1-202ENST00000451716 IGKV2D-26A0A0A0MRZ7 120 aa8.97□□□□□ -0.97
COL27A1-202ENST00000451716 CHCHD5Q9BSY4 110 aa8.97□□□□□ -0.97
COL27A1-202ENST00000451716 HERVK_113P63121 156 aa8.96□□□□□ -0.98
COL27A1-202ENST00000451716 MRPL35Q9NZE8 188 aaKnown RBP8.96□□□□□ -0.98
COL27A1-202ENST00000451716 HHLA3Q9XRX5 114 aa8.96□□□□□ -0.98
COL27A1-202ENST00000451716 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.98
COL27A1-202ENST00000451716 NOTCH3Q9UM47 2321 aa8.96□□□□□ -0.98
COL27A1-202ENST00000451716 TINCRA0A1B0GVN0 87 aa8.95□□□□□ -0.98
COL27A1-202ENST00000451716 A0A1B0GX51 115 aa8.95□□□□□ -0.98
COL27A1-202ENST00000451716 Q6Q795 121 aa8.95□□□□□ -0.98
COL27A1-202ENST00000451716 GTSCR1Q86UQ5 136 aa8.95□□□□□ -0.98
COL27A1-202ENST00000451716 FAM74A4Q5TZK3 123 aa8.95□□□□□ -0.98
COL27A1-202ENST00000451716 C11orf44Q8N8P7 122 aa8.95□□□□□ -0.98
COL27A1-202ENST00000451716 KNCNA6PVL3 124 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 NDUFA7O95182 113 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 HTN1P15515 57 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 Q8N1Y9 231 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms