RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
RTFDC1-204ENST00000449062 AP1S3Q96PC3 154 aa9.36□□□□□ -0.91
RTFDC1-204ENST00000449062 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
RTFDC1-204ENST00000449062 Q9HAA7 133 aa9.36□□□□□ -0.91
RTFDC1-204ENST00000449062 FAT1Q14517 4588 aa9.36□□□□□ -0.91
RTFDC1-204ENST00000449062 DNAH8Q96JB1 4490 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 F5H697 171 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 NTF3P20783 257 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 CTRLP40313 264 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
RTFDC1-204ENST00000449062 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 KRTAP10-1P60331 282 aa9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 FAM231DQ6ZW35 169 aa9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 GTSF1Q8WW33 167 aa9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 FAM210AQ96ND0 272 aa9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 RPP21Q9H633 154 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-204ENST00000449062 SRP19P09132 144 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-204ENST00000449062 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
RTFDC1-204ENST00000449062 WFDC2Q14508 124 aa9.33□□□□□ -0.92
RTFDC1-204ENST00000449062 TOR2AQ5JU69 321 aa9.33□□□□□ -0.92
RTFDC1-204ENST00000449062 SUMO4Q6EEV6 95 aa9.33□□□□□ -0.92
RTFDC1-204ENST00000449062 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
RTFDC1-204ENST00000449062 FOXA3P55318 350 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-204ENST00000449062 XGP55808 180 aa9.32□□□□□ -0.92
RTFDC1-204ENST00000449062 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
RTFDC1-204ENST00000449062 PSCAO43653 123 aa9.31□□□□□ -0.92
RTFDC1-204ENST00000449062 ATRAIDQ6UW56 229 aa9.31□□□□□ -0.92
RTFDC1-204ENST00000449062 Q8N814 137 aa9.31□□□□□ -0.92
RTFDC1-204ENST00000449062 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
RTFDC1-204ENST00000449062 C9JQL5 133 aa9.3□□□□□ -0.92
RTFDC1-204ENST00000449062 TRGC1P0CF51 173 aa9.3□□□□□ -0.92
RTFDC1-204ENST00000449062 ENHOQ6UWT2 76 aa9.3□□□□□ -0.92
RTFDC1-204ENST00000449062 LINC01551Q86U37 167 aa9.3□□□□□ -0.92
RTFDC1-204ENST00000449062 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
RTFDC1-204ENST00000449062 A0A087WX48 190 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 GATCO43716 136 aaKnown RBP9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 MGPP08493 103 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 GCSHP23434 173 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 TWIST1Q15672 202 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 IQCJQ1A5X6 159 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 CT83Q5H943 113 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 RASL11AQ6T310 242 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 TEX261Q6UWH6 196 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 Q8N1X5 172 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 URGCP-MRPS24S4R325 110 aa9.29□□□□□ -0.92
RTFDC1-204ENST00000449062 A8MWL6 223 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 H7C1H1 209 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 CEBPGP53567 150 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 ELOBQ15370 118 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 MPV17L2Q567V2 206 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
RTFDC1-204ENST00000449062 TMEM262E9PQX1 116 aa9.27□□□□□ -0.93
RTFDC1-204ENST00000449062 SRSF3P84103 164 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-204ENST00000449062 Q8N976 141 aa9.27□□□□□ -0.93
RTFDC1-204ENST00000449062 BAALCQ8WXS3 180 aa9.27□□□□□ -0.93
RTFDC1-204ENST00000449062 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
RTFDC1-204ENST00000449062 ZNF727A8MUV8 499 aa9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 RBX1P62877 108 aa9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 FRZBQ92765 325 aa9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 PRR34Q9NV39 138 aa9.26□□□□□ -0.93
RTFDC1-204ENST00000449062 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 FAM231BA6NCW3 169 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 LECT2O14960 151 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 Q0VG73 95 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 RMI2Q96E14 147 aa9.25□□□□□ -0.93
RTFDC1-204ENST00000449062 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 IGHV1-24A0A0C4DH33 117 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 PKIAP61925 76 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 GAGE6Q13070 117 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 FAM74A3Q4VXF1 159 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 FAM30AQ9NZY2 134 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 V9GYV3 84 aa9.24□□□□□ -0.93
RTFDC1-204ENST00000449062 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
RTFDC1-204ENST00000449062 RPL23P62829 140 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-204ENST00000449062 KCNIP4Q6PIL6 250 aa9.23□□□□□ -0.93
RTFDC1-204ENST00000449062 ISOC2Q96AB3 205 aa9.23□□□□□ -0.93
RTFDC1-204ENST00000449062 SMDT1Q9H4I9 107 aa9.23□□□□□ -0.93
RTFDC1-204ENST00000449062 VPS13BQ7Z7G8 4022 aa9.22□□□□□ -0.93
RTFDC1-204ENST00000449062 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms