RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KRTAP10-4P60372 401 aaPredicted RBP18.39■□□□□ 0.53
CBX4-202ENST00000448310 ZNF345Q14585 488 aa18.39■□□□□ 0.53
CBX4-202ENST00000448310 UMAD1C9J7I0 102 aa18.38■□□□□ 0.53
CBX4-202ENST00000448310 OR5AL1P0C617 328 aa18.38■□□□□ 0.53
CBX4-202ENST00000448310 C14orf177Q52M58 125 aa18.38■□□□□ 0.53
CBX4-202ENST00000448310 HLA-DQA1P01909 254 aa18.37■□□□□ 0.53
CBX4-202ENST00000448310 NTM-AS1Q6ZSK4 140 aa18.37■□□□□ 0.53
CBX4-202ENST00000448310 USP17L23D6RBM5 183 aa18.36■□□□□ 0.53
CBX4-202ENST00000448310 TMUB2Q71RG4 321 aa18.36■□□□□ 0.53
CBX4-202ENST00000448310 FAT3Q8TDW7 4589 aa18.35■□□□□ 0.53
CBX4-202ENST00000448310 H2AFB1P0C5Y9 115 aa18.35■□□□□ 0.53
CBX4-202ENST00000448310 CLPSL2Q6UWE3 100 aa18.35■□□□□ 0.53
CBX4-202ENST00000448310 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.35■□□□□ 0.53
CBX4-202ENST00000448310 KIF25-AS1Q9Y6Z4 181 aa18.35■□□□□ 0.53
CBX4-202ENST00000448310 BCL2L11O43521 198 aa18.33■□□□□ 0.52
CBX4-202ENST00000448310 RPL35P42766 123 aaKnown RBP18.33■□□□□ 0.52
CBX4-202ENST00000448310 DERL1Q9BUN8 251 aa18.33■□□□□ 0.52
CBX4-202ENST00000448310 VAX2Q9UIW0 290 aa18.33■□□□□ 0.52
CBX4-202ENST00000448310 PKHD1L1Q86WI1 4243 aa18.32■□□□□ 0.52
CBX4-202ENST00000448310 KANTRA0A1W2PQU2 76 aa18.32■□□□□ 0.52
CBX4-202ENST00000448310 SMIM17P0DL12 118 aa18.32■□□□□ 0.52
CBX4-202ENST00000448310 GAGE6Q13070 117 aa18.32■□□□□ 0.52
CBX4-202ENST00000448310 MIAQ16674 131 aa18.32■□□□□ 0.52
CBX4-202ENST00000448310 AP1S3Q96PC3 154 aa18.32■□□□□ 0.52
CBX4-202ENST00000448310 GZMBP10144 247 aa18.31■□□□□ 0.52
CBX4-202ENST00000448310 PKIAP61925 76 aa18.31■□□□□ 0.52
CBX4-202ENST00000448310 RBX1P62877 108 aa18.31■□□□□ 0.52
CBX4-202ENST00000448310 A0A0D9SG52 128 aa18.3■□□□□ 0.52
CBX4-202ENST00000448310 HMSDA8MTL9 139 aa18.3■□□□□ 0.52
CBX4-202ENST00000448310 IGLV2-8P01709 118 aa18.3■□□□□ 0.52
CBX4-202ENST00000448310 PRSS1P07477 247 aa18.3■□□□□ 0.52
CBX4-202ENST00000448310 TMEM97Q5BJF2 176 aa18.3■□□□□ 0.52
CBX4-202ENST00000448310 TPPP3Q9BW30 176 aa18.3■□□□□ 0.52
CBX4-202ENST00000448310 CCL20P78556 96 aa18.29■□□□□ 0.52
CBX4-202ENST00000448310 LINC00269Q8N2A0 174 aa18.29■□□□□ 0.52
CBX4-202ENST00000448310 MGPP08493 103 aa18.28■□□□□ 0.52
CBX4-202ENST00000448310 PRR34Q9NV39 138 aa18.28■□□□□ 0.52
CBX4-202ENST00000448310 GNG13Q9P2W3 67 aa18.28■□□□□ 0.52
CBX4-202ENST00000448310 TRBV25-1A0A075B6N4 114 aa18.27■□□□□ 0.52
CBX4-202ENST00000448310 KRTAP26-1Q6PEX3 210 aa18.27■□□□□ 0.52
CBX4-202ENST00000448310 CENPWQ5EE01 88 aa18.26■□□□□ 0.51
CBX4-202ENST00000448310 C11orf52Q96A22 123 aa18.26■□□□□ 0.51
CBX4-202ENST00000448310 MANBALQ9NQG1 85 aa18.25■□□□□ 0.51
CBX4-202ENST00000448310 M0QY20 66 aa18.24■□□□□ 0.51
CBX4-202ENST00000448310 IGLC6P0CF74 106 aa18.24■□□□□ 0.51
CBX4-202ENST00000448310 EIF5AP63241 154 aaKnown RBP18.24■□□□□ 0.51
CBX4-202ENST00000448310 IQCJQ1A5X6 159 aa18.24■□□□□ 0.51
CBX4-202ENST00000448310 FER1L6-AS1Q8NA97 138 aa18.24■□□□□ 0.51
CBX4-202ENST00000448310 OR2D3Q8NGH3 330 aa18.24■□□□□ 0.51
CBX4-202ENST00000448310 SUMO4Q6EEV6 95 aa18.23■□□□□ 0.51
CBX4-202ENST00000448310 HMCN2Q8NDA2 5059 aa18.22■□□□□ 0.51
CBX4-202ENST00000448310 IGLV10-54A0A075B6I4 117 aa18.22■□□□□ 0.51
CBX4-202ENST00000448310 IGHV1-24A0A0C4DH33 117 aa18.22■□□□□ 0.51
CBX4-202ENST00000448310 RPL37AP61513 92 aaKnown RBP18.22■□□□□ 0.51
CBX4-202ENST00000448310 C9orf163Q8N9P6 203 aa18.22■□□□□ 0.51
CBX4-202ENST00000448310 DAZAP1Q96EP5 407 aaKnown RBP18.22■□□□□ 0.51
CBX4-202ENST00000448310 RAB19A4D1S5 217 aa18.21■□□□□ 0.51
CBX4-202ENST00000448310 DGAT2L7PQ6IED9 249 aa18.21■□□□□ 0.51
CBX4-202ENST00000448310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.21■□□□□ 0.51
CBX4-202ENST00000448310 C19orf71A6NCJ1 209 aa18.2■□□□□ 0.5
CBX4-202ENST00000448310 NKX2-5P52952 324 aaPredicted RBP18.2■□□□□ 0.5
CBX4-202ENST00000448310 RPS20P60866 119 aaKnown RBP18.2■□□□□ 0.5
CBX4-202ENST00000448310 REG3AQ06141 175 aa18.2■□□□□ 0.5
CBX4-202ENST00000448310 H7C1H1 209 aa18.19■□□□□ 0.5
CBX4-202ENST00000448310 PANO1I0J062 215 aa18.19■□□□□ 0.5
CBX4-202ENST00000448310 OXTP01178 125 aa18.19■□□□□ 0.5
CBX4-202ENST00000448310 HNRNPA3P51991 378 aaKnown RBP18.18■□□□□ 0.5
CBX4-202ENST00000448310 CACNG7P62955 275 aa18.18■□□□□ 0.5
CBX4-202ENST00000448310 C20orf203Q8NBC4 194 aa18.18■□□□□ 0.5
CBX4-202ENST00000448310 TRAV1-1A0A0B4J248 108 aa18.17■□□□□ 0.5
CBX4-202ENST00000448310 GNG4P50150 75 aa18.17■□□□□ 0.5
CBX4-202ENST00000448310 GFRA4Q9GZZ7 299 aa18.16■□□□□ 0.5
CBX4-202ENST00000448310 IGLV4-60A0A075B6I1 120 aa18.15■□□□□ 0.5
CBX4-202ENST00000448310 RASL11AQ6T310 242 aa18.15■□□□□ 0.5
CBX4-202ENST00000448310 TMEM243Q9BU79 118 aa18.15■□□□□ 0.5
CBX4-202ENST00000448310 P01737 135 aa18.14■□□□□ 0.49
CBX4-202ENST00000448310 SERTAD4-AS1Q5TG53 156 aa18.14■□□□□ 0.49
CBX4-202ENST00000448310 LYZL1Q6UWQ5 148 aa18.14■□□□□ 0.49
CBX4-202ENST00000448310 SDIM1Q6ZPB5 146 aa18.14■□□□□ 0.49
CBX4-202ENST00000448310 TRBV20OR9-2A0A075B6H5 130 aa18.13■□□□□ 0.49
CBX4-202ENST00000448310 RAB5CP51148 216 aa18.13■□□□□ 0.49
CBX4-202ENST00000448310 CLRN3Q8NCR9 226 aa18.13■□□□□ 0.49
CBX4-202ENST00000448310 hDV102S1A0JD36 115 aa18.12■□□□□ 0.49
CBX4-202ENST00000448310 MEF2BQ02080 365 aaPredicted RBP18.12■□□□□ 0.49
CBX4-202ENST00000448310 XKRY2A2RUG3 117 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 F2Z2F3 143 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 IFNA1P01562 189 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 TRGC1P0CF51 173 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 SMIM12Q96EX1 92 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 DPH3P1Q9H4G8 78 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 MED9Q9NWA0 146 aa18.11■□□□□ 0.49
CBX4-202ENST00000448310 A0A1B0GUV1 79 aa18.1■□□□□ 0.49
CBX4-202ENST00000448310 TEX46H3BTG2 121 aa18.1■□□□□ 0.49
CBX4-202ENST00000448310 NTF3P20783 257 aa18.1■□□□□ 0.49
CBX4-202ENST00000448310 NIT2Q9NQR4 276 aa18.1■□□□□ 0.49
CBX4-202ENST00000448310 TRAV8-4A0A0B4J246 113 aa18.09■□□□□ 0.49
CBX4-202ENST00000448310 PDE6DO43924 150 aa18.09■□□□□ 0.49
CBX4-202ENST00000448310 SULT1A2P50226 295 aa18.09■□□□□ 0.49
CBX4-202ENST00000448310 CNBPP62633 177 aaKnown RBP18.08■□□□□ 0.48
CBX4-202ENST00000448310 PGLYRP4Q96LB8 373 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms