RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
ATG9A-215ENST00000446716 UBL5Q9BZL1 73 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 LY6LH3BQJ8 138 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 BRWD1-AS2P59051 145 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 FAM222AQ5U5X8 452 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 HAMPP81172 84 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 C1orf229Q6ZS94 237 aaPredicted RBP13.51□□□□□ -0.25
ATG9A-215ENST00000446716 COX7B2Q8TF08 81 aa13.51□□□□□ -0.25
ATG9A-215ENST00000446716 TRBV10-1A0A0K0K1A3 114 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 CEND1Q8N111 149 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 LINC01006Q8NI28 216 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 IGHV4-4A0A075B6R2 117 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 CTRLP40313 264 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 UBE2V1Q13404 147 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 ZFAND6Q6FIF0 208 aa13.5□□□□□ -0.25
ATG9A-215ENST00000446716 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 Q6ZPA2 131 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 SMIM9A6NGZ8 99 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 Q6ZTI0 123 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 RNF183Q96D59 192 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 PLA2G2EQ9NZK7 142 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
ATG9A-215ENST00000446716 PRSS47A8MTI9 375 aa13.48□□□□□ -0.25
ATG9A-215ENST00000446716 TRBV6-1A0A0K0K1D8 114 aa13.48□□□□□ -0.25
ATG9A-215ENST00000446716 PSMG3-AS1Q96PY0 264 aa13.48□□□□□ -0.25
ATG9A-215ENST00000446716 COX11Q9Y6N1 276 aa13.48□□□□□ -0.25
ATG9A-215ENST00000446716 BVES-AS1Q5T3Y7 98 aa13.48□□□□□ -0.25
ATG9A-215ENST00000446716 TLN2Q9Y4G6 2542 aa13.48□□□□□ -0.25
ATG9A-215ENST00000446716 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
ATG9A-215ENST00000446716 SND1-IT1Q9HBX3 110 aa13.47□□□□□ -0.25
ATG9A-215ENST00000446716 DEFB131BA0A096LNP1 70 aa13.47□□□□□ -0.25
ATG9A-215ENST00000446716 LYRM9A8MSI8 78 aa13.47□□□□□ -0.25
ATG9A-215ENST00000446716 FAM110AQ9BQ89 295 aa13.47□□□□□ -0.25
ATG9A-215ENST00000446716 ANKRD11Q6UB99 2663 aaPredicted RBP13.47□□□□□ -0.25
ATG9A-215ENST00000446716 ZNF462Q96JM2 2506 aa13.47□□□□□ -0.25
ATG9A-215ENST00000446716 CRYGBP07316 175 aa13.47□□□□□ -0.25
ATG9A-215ENST00000446716 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 ZNF702PQ9H963 129 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 PCNX3Q9H6A9 2034 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 C9orf118A6NHY6 69 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 CCL25O15444 150 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 ABCA12Q86UK0 2595 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 CEP192Q8TEP8 1941 aa13.46□□□□□ -0.25
ATG9A-215ENST00000446716 CRIP3Q6Q6R5 217 aa13.46□□□□□ -0.26
ATG9A-215ENST00000446716 ZNF106Q9H2Y7 1883 aaKnown RBP13.46□□□□□ -0.26
ATG9A-215ENST00000446716 ODF3Q96PU9 254 aa13.46□□□□□ -0.26
ATG9A-215ENST00000446716 IFITM1P13164 125 aa13.45□□□□□ -0.26
ATG9A-215ENST00000446716 KIAA1549LQ6ZVL6 1849 aa13.45□□□□□ -0.26
ATG9A-215ENST00000446716 SIVA1O15304 175 aa13.45□□□□□ -0.26
ATG9A-215ENST00000446716 UBE2AP49459 152 aa13.45□□□□□ -0.26
ATG9A-215ENST00000446716 ALPK3Q96L96 1907 aa13.45□□□□□ -0.26
ATG9A-215ENST00000446716 PCP2Q8IVA1 136 aa13.45□□□□□ -0.26
ATG9A-215ENST00000446716 HIST2H2BDQ6DRA6 164 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 TIMM17AQ99595 171 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 CXCL5P42830 114 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 TINCRA0A1B0GVN0 87 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 K7ERJ3 54 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 CFC1BP0CG36 223 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 CFC1P0CG37 223 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
ATG9A-215ENST00000446716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
ATG9A-215ENST00000446716 TP53TG3Q9ULZ0 132 aa13.43□□□□□ -0.26
ATG9A-215ENST00000446716 C11orf1Q9H5F2 150 aa13.43□□□□□ -0.26
ATG9A-215ENST00000446716 hADV29S1A0JD25 119 aa13.42□□□□□ -0.26
ATG9A-215ENST00000446716 PSMB8P28062 276 aa13.42□□□□□ -0.26
ATG9A-215ENST00000446716 ZNF80P51504 273 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-215ENST00000446716 C15orf53Q8NAA6 179 aa13.42□□□□□ -0.26
ATG9A-215ENST00000446716 USP9XQ93008 2570 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-215ENST00000446716 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
ATG9A-215ENST00000446716 MIFP14174 115 aa13.41□□□□□ -0.26
ATG9A-215ENST00000446716 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
ATG9A-215ENST00000446716 C14orf177Q52M58 125 aa13.41□□□□□ -0.26
ATG9A-215ENST00000446716 ORMDL1Q9P0S3 153 aa13.41□□□□□ -0.26
ATG9A-215ENST00000446716 C19orf71A6NCJ1 209 aa13.41□□□□□ -0.26
ATG9A-215ENST00000446716 ZFAND3Q9H8U3 227 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 ETDBQ3ZM63 59 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 TOMM6Q96B49 74 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 TRAV12-1A0A0B4J245 112 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 GAGE12HA6NDE8 117 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 LINC00173Q6ZV60 143 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 SMR3AQ99954 134 aa13.4□□□□□ -0.26
ATG9A-215ENST00000446716 PPDPFLQ8WWR9 84 aa13.39□□□□□ -0.27
ATG9A-215ENST00000446716 BAALCQ8WXS3 180 aa13.39□□□□□ -0.27
ATG9A-215ENST00000446716 LRRK2Q5S007 2527 aa13.39□□□□□ -0.27
ATG9A-215ENST00000446716 EIF4EBP1Q13541 118 aaPredicted RBP13.39□□□□□ -0.27
ATG9A-215ENST00000446716 WDR87Q6ZQQ6 2873 aa13.39□□□□□ -0.27
ATG9A-215ENST00000446716 MUC22E2RYF6 1773 aaPredicted RBP13.39□□□□□ -0.27
ATG9A-215ENST00000446716 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
ATG9A-215ENST00000446716 P0DMU3 169 aa13.38□□□□□ -0.27
ATG9A-215ENST00000446716 FAM231AP0DMU4 169 aa13.38□□□□□ -0.27
ATG9A-215ENST00000446716 FAM231CP0DMU5 169 aa13.38□□□□□ -0.27
ATG9A-215ENST00000446716 FASNP49327 2511 aaKnown RBP13.38□□□□□ -0.27
ATG9A-215ENST00000446716 IGKV2-24A0A0C4DH68 120 aa13.37□□□□□ -0.27
ATG9A-215ENST00000446716 Q8N6K4 173 aa13.37□□□□□ -0.27
ATG9A-215ENST00000446716 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
ATG9A-215ENST00000446716 GTSF1LQ9H1H1 148 aa13.37□□□□□ -0.27
ATG9A-215ENST00000446716 FUSP35637 526 aaKnown RBP eCLIP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms