RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
TIMP1-204ENST00000445623 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
TIMP1-204ENST00000445623 GNB1LQ9BYB4 327 aa9.18□□□□□ -0.94
TIMP1-204ENST00000445623 APLNQ9ULZ1 77 aa9.18□□□□□ -0.94
TIMP1-204ENST00000445623 TNFRSF18Q9Y5U5 241 aa9.18□□□□□ -0.94
TIMP1-204ENST00000445623 A0A096LPF7 62 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 TGIF2-C20orf24A0A0A6YYL0 155 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 TRAV26-2A0A0B4J265 109 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 PPBPP02775 128 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 P0DMU3 169 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 FAM231AP0DMU4 169 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 FAM231CP0DMU5 169 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
TIMP1-204ENST00000445623 NEXN-AS1Q8NBZ9 246 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 ZNRF2Q8NHG8 242 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
TIMP1-204ENST00000445623 CKS2P33552 79 aa9.16□□□□□ -0.94
TIMP1-204ENST00000445623 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
TIMP1-204ENST00000445623 TMEM136Q6ZRR5 245 aa9.16□□□□□ -0.94
TIMP1-204ENST00000445623 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
TIMP1-204ENST00000445623 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
TIMP1-204ENST00000445623 CCL18P55774 89 aa9.15□□□□□ -0.94
TIMP1-204ENST00000445623 ORMDL3Q8N138 153 aa9.15□□□□□ -0.94
TIMP1-204ENST00000445623 CSMD3Q7Z407 3707 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 D6R8Y8 96 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 NCR2O95944 276 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 APCSP02743 223 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 UBE2D3P61077 147 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 UBE2D2P62837 147 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
TIMP1-204ENST00000445623 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
TIMP1-204ENST00000445623 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
TIMP1-204ENST00000445623 DYNC2H1Q8NCM8 4307 aaKnown RBP9.13□□□□□ -0.95
TIMP1-204ENST00000445623 TRBV6-5A0A0K0K1A5 114 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 PHOX2AO14813 284 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 TIRAPP58753 221 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 TMEM97Q5BJF2 176 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
TIMP1-204ENST00000445623 GTSF1LQ9H1H1 148 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 Q9UF83 564 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 LAMTOR2Q9Y2Q5 125 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 STARD9Q9P2P6 4700 aa9.13□□□□□ -0.95
TIMP1-204ENST00000445623 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
TIMP1-204ENST00000445623 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
TIMP1-204ENST00000445623 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
TIMP1-204ENST00000445623 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
TIMP1-204ENST00000445623 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
TIMP1-204ENST00000445623 SCO1O75880 301 aa9.11□□□□□ -0.95
TIMP1-204ENST00000445623 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
TIMP1-204ENST00000445623 RPS10P46783 165 aaKnown RBP9.11□□□□□ -0.95
TIMP1-204ENST00000445623 SUMO2P61956 95 aaKnown RBP9.11□□□□□ -0.95
TIMP1-204ENST00000445623 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
TIMP1-204ENST00000445623 NRACQ8N912 160 aa9.11□□□□□ -0.95
TIMP1-204ENST00000445623 C20orf78Q9BR46 151 aa9.11□□□□□ -0.95
TIMP1-204ENST00000445623 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
TIMP1-204ENST00000445623 ESRGQ1W209 222 aa9.1□□□□□ -0.95
TIMP1-204ENST00000445623 LGALS9CQ6DKI2 356 aa9.1□□□□□ -0.95
TIMP1-204ENST00000445623 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
TIMP1-204ENST00000445623 TRAV8-6A0A0B4J262 113 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 I3L3M4 83 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 NPYP01303 97 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 PMCHP20382 165 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 COTL1Q14019 142 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 LELP1Q5T871 98 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 LINC00588Q9Y4M8 146 aa9.09□□□□□ -0.95
TIMP1-204ENST00000445623 COLCA2A8K830 154 aa9.08□□□□□ -0.96
TIMP1-204ENST00000445623 VCYO14598 125 aa9.08□□□□□ -0.96
TIMP1-204ENST00000445623 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
TIMP1-204ENST00000445623 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
TIMP1-204ENST00000445623 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 TCAPO15273 167 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 LY6G6CO95867 125 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 RAB5AP20339 215 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
TIMP1-204ENST00000445623 LINC00476Q8WZB0 136 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 UPK3BQ9BT76 320 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
TIMP1-204ENST00000445623 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
TIMP1-204ENST00000445623 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
TIMP1-204ENST00000445623 IGHV1-24A0A0C4DH33 117 aa9.06□□□□□ -0.96
TIMP1-204ENST00000445623 PRSS47A8MTI9 375 aa9.05□□□□□ -0.96
TIMP1-204ENST00000445623 FCER1GP30273 86 aa9.05□□□□□ -0.96
TIMP1-204ENST00000445623 AMTP48728 403 aa9.05□□□□□ -0.96
TIMP1-204ENST00000445623 PKIAP61925 76 aa9.05□□□□□ -0.96
TIMP1-204ENST00000445623 IQCJQ1A5X6 159 aa9.05□□□□□ -0.96
TIMP1-204ENST00000445623 ALKBH7Q9BT30 221 aaPredicted RBP9.05□□□□□ -0.96
TIMP1-204ENST00000445623 LOC389332A0A1B0GUA5 103 aa9.04□□□□□ -0.96
TIMP1-204ENST00000445623 SIVA1O15304 175 aa9.04□□□□□ -0.96
TIMP1-204ENST00000445623 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
TIMP1-204ENST00000445623 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms