RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 NXT2Q9NPJ8 142 aaKnown RBP11.27□□□□□ -0.61
MCF2L-217ENST00000441756 NDUFA6P56556 154 aa11.26□□□□□ -0.61
MCF2L-217ENST00000441756 SUMO2P61956 95 aaKnown RBP11.26□□□□□ -0.61
MCF2L-217ENST00000441756 FHL2Q14192 279 aa11.26□□□□□ -0.61
MCF2L-217ENST00000441756 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
MCF2L-217ENST00000441756 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
MCF2L-217ENST00000441756 TNFRSF18Q9Y5U5 241 aa11.26□□□□□ -0.61
MCF2L-217ENST00000441756 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
MCF2L-217ENST00000441756 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
MCF2L-217ENST00000441756 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
MCF2L-217ENST00000441756 FA2HQ7L5A8 372 aa11.25□□□□□ -0.61
MCF2L-217ENST00000441756 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
MCF2L-217ENST00000441756 SMIM2Q9BVW6 85 aa11.25□□□□□ -0.61
MCF2L-217ENST00000441756 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
MCF2L-217ENST00000441756 NACAE9PAV3 2078 aa11.24□□□□□ -0.61
MCF2L-217ENST00000441756 GAS8-AS1O95177 125 aa11.24□□□□□ -0.61
MCF2L-217ENST00000441756 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
MCF2L-217ENST00000441756 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
MCF2L-217ENST00000441756 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
MCF2L-217ENST00000441756 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
MCF2L-217ENST00000441756 HHLA3Q9XRX5 114 aa11.24□□□□□ -0.61
MCF2L-217ENST00000441756 LOC389332A0A1B0GUA5 103 aa11.23□□□□□ -0.61
MCF2L-217ENST00000441756 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
MCF2L-217ENST00000441756 F5H768 121 aa11.23□□□□□ -0.61
MCF2L-217ENST00000441756 K7EMI3 77 aa11.23□□□□□ -0.61
MCF2L-217ENST00000441756 TCAPO15273 167 aa11.23□□□□□ -0.61
MCF2L-217ENST00000441756 Q6ZSN1 163 aa11.23□□□□□ -0.61
MCF2L-217ENST00000441756 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
MCF2L-217ENST00000441756 VCYO14598 125 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 HTN3P15516 51 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 RNASEKQ6P5S7 137 aaKnown RBP11.22□□□□□ -0.61
MCF2L-217ENST00000441756 Q8N8P6 123 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 AP5S1Q9NUS5 200 aa11.22□□□□□ -0.61
MCF2L-217ENST00000441756 TRBV7-3A0A075B6L6 115 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 PAX4O43316 350 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 SERF1AO75920 110 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 LINC00614P0C842 121 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 P0DMU3 169 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 FAM231AP0DMU4 169 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 FAM231CP0DMU5 169 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 HOXA5P20719 270 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 CRYBA4P53673 196 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 NIT1Q86X76 327 aa11.21□□□□□ -0.61
MCF2L-217ENST00000441756 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
MCF2L-217ENST00000441756 HSBP1O75506 76 aa11.2□□□□□ -0.62
MCF2L-217ENST00000441756 IFI27P40305 119 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-217ENST00000441756 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
MCF2L-217ENST00000441756 Q6ZTC4 211 aa11.2□□□□□ -0.62
MCF2L-217ENST00000441756 I3L3M4 83 aa11.19□□□□□ -0.62
MCF2L-217ENST00000441756 FCER1GP30273 86 aa11.19□□□□□ -0.62
MCF2L-217ENST00000441756 NANOS2P60321 138 aaKnown RBP11.19□□□□□ -0.62
MCF2L-217ENST00000441756 DAZ4Q86SG3 579 aaKnown RBP11.19□□□□□ -0.62
MCF2L-217ENST00000441756 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
MCF2L-217ENST00000441756 DAZ3Q9NR90 486 aaKnown RBP11.19□□□□□ -0.62
MCF2L-217ENST00000441756 NBEAL2Q6ZNJ1 2754 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 LINC01546A6NGU7 62 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 H3BNG1 76 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 ESDP10768 282 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 G0S2P27469 103 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 S100A2P29034 98 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 GAGE1Q13065 139 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 GAGE4Q13068 117 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 GAGE5Q13069 117 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 ORMDL2Q53FV1 153 aa11.18□□□□□ -0.62
MCF2L-217ENST00000441756 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 GYPEP15421 78 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 UBE2D3P61077 147 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
MCF2L-217ENST00000441756 UBE2D2P62837 147 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 TMEM97Q5BJF2 176 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 SH2D6Q7Z4S9 175 aa11.17□□□□□ -0.62
MCF2L-217ENST00000441756 TRAV26-1A0A087WT03 109 aa11.16□□□□□ -0.62
MCF2L-217ENST00000441756 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
MCF2L-217ENST00000441756 COTL1Q14019 142 aa11.16□□□□□ -0.62
MCF2L-217ENST00000441756 LAGE3Q14657 143 aa11.16□□□□□ -0.62
MCF2L-217ENST00000441756 ICOSQ9Y6W8 199 aa11.16□□□□□ -0.62
MCF2L-217ENST00000441756 A0A0J9YY99 117 aa11.15□□□□□ -0.62
MCF2L-217ENST00000441756 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
MCF2L-217ENST00000441756 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
MCF2L-217ENST00000441756 LINC00310P59036 64 aa11.15□□□□□ -0.62
MCF2L-217ENST00000441756 MRPL23Q16540 153 aaKnown RBP11.15□□□□□ -0.62
MCF2L-217ENST00000441756 TMEM18Q96B42 140 aa11.15□□□□□ -0.62
MCF2L-217ENST00000441756 URB1-AS1Q96HZ7 61 aa11.15□□□□□ -0.62
MCF2L-217ENST00000441756 LOC100131303A0A0U1RQF7 123 aa11.14□□□□□ -0.63
MCF2L-217ENST00000441756 AMTP48728 403 aa11.14□□□□□ -0.63
MCF2L-217ENST00000441756 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
MCF2L-217ENST00000441756 HIST3H2BBQ8N257 126 aa11.14□□□□□ -0.63
MCF2L-217ENST00000441756 VSIG2Q96IQ7 327 aa11.14□□□□□ -0.63
MCF2L-217ENST00000441756 HBDP02042 147 aa11.13□□□□□ -0.63
MCF2L-217ENST00000441756 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
MCF2L-217ENST00000441756 ATP6V0E2Q8NHE4 81 aa11.13□□□□□ -0.63
MCF2L-217ENST00000441756 PHLDA1Q8WV24 401 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-217ENST00000441756 PACRGQ96M98 296 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms