RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 C2orf91Q6ZV80 131 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 DEFB107AQ8IZN7 70 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 ORMDL3Q8N138 153 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 FAM216BQ8N7L0 139 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 VPS13AQ96RL7 3174 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 PCNX2A6NKB5 2137 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 IGKV1D-17A0A075B6S4 117 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 IGHV3OR15-7A0A075B7D8 119 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 C3orf84H3BNL1 204 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 CCL5P13501 91 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 UBE2G1P62253 170 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 MIR17HGQ75NE6 70 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 CCL4L1Q8NHW4 92 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 LINC01560Q8TB33 94 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 TVP23CQ96ET8 276 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 CHCHD7Q9BUK0 85 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 MANBALQ9NQG1 85 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 TP53TG3Q9ULZ0 132 aa2.61□□□□□ -1.99
CDC42BPA-207ENST00000441725 LRRC37A2A6NM11 1700 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 NBEAQ8NFP9 2946 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 DOPEY1Q5JWR5 2465 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 SNRPGP15A8MWD9 76 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 PIRTP0C851 137 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 C3orf79P0CE67 100 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 MDKP21741 143 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 PEBP1P30086 187 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 CKS2P33552 79 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 LYPD5Q6UWN5 251 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 CST11Q9H112 138 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 SPTBN2O15020 2390 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 CACNA1HO95180 2353 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 DIDO1Q9BTC0 2240 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 THADAQ6YHU6 1953 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 ZNF831Q5JPB2 1677 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 CCL3P10147 92 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 RHOHQ15669 191 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 MRPL51Q4U2R6 128 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 TRGV9Q99603 122 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 SLC50A1Q9BRV3 221 aa2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 NYNRINQ9P2P1 1898 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-207ENST00000441725 ABCA12Q86UK0 2595 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 IGKV6D-41A0A0C4DH26 115 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 B4DSR2 109 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 PLXNA2O75051 1894 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 PTHLHP12272 177 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 DSCR4P56555 118 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 C12orf73Q69YU5 71 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 ZFAND2AQ8N6M9 145 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 CHCHD1Q96BP2 118 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 RMI2Q96E14 147 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 LINC01600Q96MT4 127 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 HILPDAQ9Y5L2 63 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 CHD7Q9P2D1 2997 aa2.59□□□□□ -1.99
CDC42BPA-207ENST00000441725 TENM4Q6N022 2769 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 ITPR3Q14573 2671 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 PLXNA1Q9UIW2 1896 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 TRAV14DV4A0A0A6YYC5 116 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 IGHV3-43A0A0B4J1X8 118 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 A0A1B0GW54 56 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 COX8AP10176 69 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 C11orf1Q9H5F2 150 aa2.59□□□□□ -2
CDC42BPA-207ENST00000441725 DMDP11532 3685 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 FBN3Q75N90 2809 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 TSC2P49815 1807 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 IGLV4-69A0A075B6H9 119 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 A6NED7 52 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 C19orf84I3L1E1 186 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 J3QLW9 94 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 TRGV3P03979 118 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 KRTAP1-4P0C5Y4 121 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 NPPCP23582 126 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 SNRPFP62306 86 aaKnown RBP2.58□□□□□ -2
CDC42BPA-207ENST00000441725 Q1T7F1 81 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.58□□□□□ -2
CDC42BPA-207ENST00000441725 Q5W150 140 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 CD163L1Q9NR16 1453 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 DOCK11Q5JSL3 2073 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 TEX15Q9BXT5 2789 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 NINQ8N4C6 2090 aa2.58□□□□□ -2
CDC42BPA-207ENST00000441725 HECTD1Q9ULT8 2610 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 IGHV1-24A0A0C4DH33 117 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 C19orf71A6NCJ1 209 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 CRYM-AS1A6NIL9 109 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 A8MWP4 228 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 F2Z2F3 143 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 HCRTO43612 131 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 RPL27AP46776 148 aaKnown RBP2.57□□□□□ -2
CDC42BPA-207ENST00000441725 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 CEP250Q9BV73 2442 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 MUC4Q99102 2169 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 FRYLO94915 3013 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 SCN3AQ9NY46 2000 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 LOC107984156A0A0G2JMH3 177 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 H7BZZ5 65 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 SAA1P0DJI8 122 aaPredicted RBP2.57□□□□□ -2
CDC42BPA-207ENST00000441725 SUPT4H1P63272 117 aaKnown RBP2.57□□□□□ -2
CDC42BPA-207ENST00000441725 ARL17AQ8IVW1 177 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 LINC00269Q8N2A0 174 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms