RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 GAGE13Q4V321 117 aa10.02□□□□□ -0.81
HERPUD1-204ENST00000439977 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
HERPUD1-204ENST00000439977 WNK1Q9H4A3 2382 aa10.02□□□□□ -0.81
HERPUD1-204ENST00000439977 RBMY1A1P0DJD3 496 aaKnown RBP10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 RBMY1CP0DJD4 496 aa10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 SPANXB1Q9NS25 103 aaPredicted RBP10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 ZNF580Q9UK33 172 aa10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 RNASE13Q5GAN3 156 aaKnown RBP10.01□□□□□ -0.81
HERPUD1-204ENST00000439977 A0A0J9YY99 117 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 LGALS9O00182 355 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 SLURP1P55000 103 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 CEMP1Q6PRD7 247 aaPredicted RBP10□□□□□ -0.81
HERPUD1-204ENST00000439977 CHD6Q8TD26 2715 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 F8W1H4 67 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 HERVK_113P61574 105 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 SYT8Q8NBV8 401 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 TSSC4Q9Y5U2 329 aaPredicted RBP10□□□□□ -0.81
HERPUD1-204ENST00000439977 PSMB2P49721 201 aa10□□□□□ -0.81
HERPUD1-204ENST00000439977 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
HERPUD1-204ENST00000439977 DEFB131AP59861 70 aa9.99□□□□□ -0.81
HERPUD1-204ENST00000439977 KHDC1LQ5JSQ8 128 aa9.99□□□□□ -0.81
HERPUD1-204ENST00000439977 ZNF418Q8TF45 676 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-204ENST00000439977 CCDC168Q8NDH2 2452 aa9.99□□□□□ -0.81
HERPUD1-204ENST00000439977 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-204ENST00000439977 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 TSPAN13O95857 204 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 A0A0J9YXV3 536 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 J3QQQ9 107 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
HERPUD1-204ENST00000439977 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 PTH2Q96A98 100 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 TMEM238LA0A1B0GVL6 79 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 A6NJY4 79 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 H7C2G1 150 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
HERPUD1-204ENST00000439977 LGALS3P17931 250 aaKnown RBP9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 UBE2D1P51668 147 aa9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 TRPT1Q86TN4 253 aaKnown RBP9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 VPREB3Q9UKI3 123 aa9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 TRBV6-5A0A0K0K1A5 114 aa9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 KRTAP10-9P60411 292 aa9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 RAX2Q96IS3 184 aa9.96□□□□□ -0.81
HERPUD1-204ENST00000439977 NACAE9PAV3 2078 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 LINC01619G3V211 115 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 GATA3P23771 443 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 SAMD13Q5VXD3 122 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 SPXQ9BT56 116 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
HERPUD1-204ENST00000439977 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 CFC1P0CG37 223 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 PRRC2AP48634 2157 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 TRAV2A0A0B4J234 112 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 TMEM238C9JI98 176 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 I3L3M4 83 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 AZU1P20160 251 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 VCX2Q9H322 139 aa9.95□□□□□ -0.82
HERPUD1-204ENST00000439977 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 AMELXQ99217 191 aa9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 A0A096LNT2 108 aa9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 Q6ZSN1 163 aa9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 SLC25A29Q8N8R3 303 aa9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 USP24Q9UPU5 2620 aa9.94□□□□□ -0.82
HERPUD1-204ENST00000439977 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 RBMY1BA6NDE4 496 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 GAGE12HA6NDE8 117 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 RBMY1EA6NEQ0 496 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 RBMY1DP0C7P1 496 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 TMEM61Q8N0U2 210 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 UBE2E2Q96LR5 201 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 A8MZ25 164 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
HERPUD1-204ENST00000439977 A4D1N5 150 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 CD28P10747 220 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 DSCR9P59020 149 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 NSUN5P1Q3KNT7 163 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 JMJD1CQ15652 2540 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 RHODO00212 210 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 TCL1BO95988 128 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms