RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TRAV26-1A0A087WT03 109 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 TRGV1A0A0A0MS02 117 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 GAGE12BA1L429 117 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 GAGE7O76087 117 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 GAGE12FP0CL80 117 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 GAGE12GP0CL81 117 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 GAGE12IP0CL82 117 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 RAB4BP61018 213 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 HBBP68871 147 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 ATP5L2Q7Z4Y8 100 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 MRPL16Q9NX20 251 aaKnown RBP6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 HSPG2P98160 4391 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 LRP1BQ9NZR2 4599 aa6.39□□□□□ -1.39
AC011228.1-201ENST00000439027 A0A1B0GW15 77 aa6.38□□□□□ -1.39
AC011228.1-201ENST00000439027 NXPH4O95158 308 aa6.38□□□□□ -1.39
AC011228.1-201ENST00000439027 Q6ZTI0 123 aa6.38□□□□□ -1.39
AC011228.1-201ENST00000439027 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
AC011228.1-201ENST00000439027 Q9H8V8 135 aa6.38□□□□□ -1.39
AC011228.1-201ENST00000439027 JPT2Q9H910 190 aa6.38□□□□□ -1.39
AC011228.1-201ENST00000439027 S100A8P05109 93 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 RAB5AP20339 215 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 EVI2AP22794 236 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 RPS10P46783 165 aaKnown RBP6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 RASL11AQ6T310 242 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 TMEM136Q6ZRR5 245 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 SMIM15Q7Z3B0 74 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 RASL10AQ92737 203 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 PTH2Q96A98 100 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 AP1S3Q96PC3 154 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
AC011228.1-201ENST00000439027 TRGV2A0A075B6R0 118 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 SMIM17P0DL12 118 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 HOXA5P20719 270 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 ESRGQ1W209 222 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 COX19Q49B96 90 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 PIK3CD-AS1Q5SR53 167 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 LINC00612Q8N6U2 182 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 FRZBQ92765 325 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 GNB1LQ9BYB4 327 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 SAMD10Q9BYL1 202 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 TMEM191AQ9H0A3 160 aa6.36□□□□□ -1.39
AC011228.1-201ENST00000439027 A0A087WWL8 130 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 A8MWV9 139 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 MGPP08493 103 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 FAM74A4Q5TZK3 123 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 CFAP126Q5VTH2 177 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 FAM104BQ5XKR9 115 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 AMN1Q8IY45 258 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 MAPKAPK5-AS1Q8N8E1 139 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
AC011228.1-201ENST00000439027 IGHV3-73A0A0B4J1V6 119 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 RS1O15537 224 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 CDK2AP2O75956 126 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 IGHV3-53P01767 116 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 APCSP02743 223 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 MT-ND6P03923 174 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 CRYGDP07320 174 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 FABP9Q0Z7S8 132 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 SLAQ13239 276 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 KIAA1644Q3SXP7 199 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 OR4C5Q8NGB2 326 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 MRPS16Q9Y3D3 137 aaKnown RBP6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 KIF25-AS1Q9Y6Z4 181 aa6.34□□□□□ -1.39
AC011228.1-201ENST00000439027 TRAV4A0A0B4J268 109 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 F5H697 171 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 H3BNG1 76 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 TRGC2P03986 189 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 RAB4AP20338 218 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 LINC00315P59091 139 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 ZNF56Q15929 161 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 RNF185Q96GF1 192 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 ZNF479Q96JC4 524 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
AC011228.1-201ENST00000439027 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 A0A096LPF7 62 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 SMKR1H3BMG3 65 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 RHODO00212 210 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 CKS2P33552 79 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 MRPL51Q4U2R6 128 aaKnown RBP6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 UFSP1Q6NVU6 142 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 ZFP2Q6ZN57 461 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
AC011228.1-201ENST00000439027 TRAV26-2A0A0B4J265 109 aa6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 D6R8Y8 96 aa6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 NCR2O95944 276 aa6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 GATA1P15976 413 aaPredicted RBP6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms