RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LAMA3Q16787 3333 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 C6orf226Q5I0X4 101 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 COX8CQ7Z4L0 72 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 ATP6V0E2Q8NHE4 81 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 PTH2Q96A98 100 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 HHLA3Q9XRX5 114 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 LINC01620Q4KN68 170 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 OPRPNQ99935 248 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-205ENST00000438362 NOTCH2Q04721 2471 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 NAV2Q8IVL1 2488 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 IGHV4-4A0A075B6R2 117 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 F8W735 103 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-205ENST00000438362 UFSP1Q6NVU6 142 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 OVOL2Q9BRP0 275 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 IFITM1P13164 125 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 MALP21145 153 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 DEFB136Q30KP8 78 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 TMEM243Q9BU79 118 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 U3KQE9 123 aa5.05□□□□□ -1.6
CSDE1-205ENST00000438362 CLPSL1A2RUU4 121 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 PRR9Q5T870 116 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 C15orf53Q8NAA6 179 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 C11orf68Q9H3H3 251 aaKnown RBP5.04□□□□□ -1.6
CSDE1-205ENST00000438362 Q9H8V8 135 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 A0A0J9YY99 117 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 INAFM2P0DMQ5 153 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 RAI1Q7Z5J4 1906 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-205ENST00000438362 IGHV4OR15-8A0A075B7B6 117 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 A0A087WW49 117 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 SLURP1P55000 103 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE2AQ6NT46 116 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 SLC25A29Q8N8R3 303 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 DNAJC30Q96LL9 226 aa5.04□□□□□ -1.6
CSDE1-205ENST00000438362 CCDC168Q8NDH2 2452 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 HIVEP3Q5T1R4 2406 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 TCL1BO95988 128 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 CRYBA4P53673 196 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 CFHR3Q02985 330 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 USP9YO00507 2555 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-205ENST00000438362 TMEM89A2RUT3 159 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE7O76087 117 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE12FP0CL80 117 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE12GP0CL81 117 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE12IP0CL82 117 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 IGHV3-30-3P0DP02 117 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 NSUN5P1Q3KNT7 163 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 ICOSQ9Y6W8 199 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 PCSK5Q92824 1860 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 DEFB130BP0DP73 79 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 DEFB130AP0DP74 79 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 RNASE3P12724 160 aaKnown RBP5.03□□□□□ -1.6
CSDE1-205ENST00000438362 HTN3P15516 51 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 RNF152Q8N8N0 203 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 ODF3Q96PU9 254 aa5.03□□□□□ -1.6
CSDE1-205ENST00000438362 USP9XQ93008 2570 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-205ENST00000438362 IGHG4P01861 327 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 Q6ZQT7 251 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 APRG1Q8IVJ8 170 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 TRBV7-3A0A075B6L6 115 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 IGHV1-58A0A0C4DH39 117 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 K7EQG2 157 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 PFN2P35080 140 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 GAGE6Q13070 117 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 CDSNQ15517 529 aa5.02□□□□□ -1.61
CSDE1-205ENST00000438362 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 TRBV27A0A0K0K1C4 114 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 LGALS9O00182 355 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 RPL32P62910 135 aaKnown RBP5.01□□□□□ -1.61
CSDE1-205ENST00000438362 SS18Q15532 418 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 TRBV10-2A0A0K0K1G8 114 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 S100A7L2Q5SY68 101 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 PSMG3-AS1Q96PY0 264 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 PTPRBP23467 1997 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 A0A0B4J2C4 111 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 C19orf84I3L1E1 186 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 M0QY20 66 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-205ENST00000438362 POLR2KP53803 58 aaKnown RBP5.01□□□□□ -1.61
CSDE1-205ENST00000438362 CEMP1Q6PRD7 247 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-205ENST00000438362 Q96MF0 132 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 UNC80Q8N2C7 3258 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 TLN2Q9Y4G6 2542 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 AGRNO00468 2067 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 A0A0J9YXY3 114 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 TRBV6-5A0A0K0K1A5 114 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 DAND5Q8N907 189 aa5.01□□□□□ -1.61
CSDE1-205ENST00000438362 SONP18583 2426 aaKnown RBP5□□□□□ -1.61
CSDE1-205ENST00000438362 KLLNB2CW77 178 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 H3BT86 120 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 HERV-K104P63124 156 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 Q6ZUT4 128 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 TMEM61Q8N0U2 210 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 NRGNQ92686 78 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 VSIG2Q96IQ7 327 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 IGLV4-3A0A075B6K6 122 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 B5MCH6 92 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 P0DMU3 169 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 FAM231AP0DMU4 169 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 FAM231CP0DMU5 169 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms