RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IGLV2-18A0A075B6J9 118 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 CRYGDP07320 174 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 PTTG1IPP53801 180 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 UBE2V1Q13404 147 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 F5H697 171 aa15.33■□□□□ 0.04
PTPRF-207ENST00000436724 PRIMA1Q86XR5 153 aa15.33■□□□□ 0.04
PTPRF-207ENST00000436724 POM121L12Q8N7R1 296 aa15.33■□□□□ 0.04
PTPRF-207ENST00000436724 DKK2Q9UBU2 259 aa15.33■□□□□ 0.04
PTPRF-207ENST00000436724 ZNF415Q09FC8 603 aa15.32■□□□□ 0.04
PTPRF-207ENST00000436724 SUMO4Q6EEV6 95 aa15.32■□□□□ 0.04
PTPRF-207ENST00000436724 C18orf15Q96N68 181 aa15.32■□□□□ 0.04
PTPRF-207ENST00000436724 LINC00467Q9BRT7 94 aa15.32■□□□□ 0.04
PTPRF-207ENST00000436724 Q8N8P6 123 aa15.32■□□□□ 0.04
PTPRF-207ENST00000436724 GTSCR1Q86UQ5 136 aa15.31■□□□□ 0.04
PTPRF-207ENST00000436724 BOD1L2Q8IYS8 172 aa15.31■□□□□ 0.04
PTPRF-207ENST00000436724 PRSS47A8MTI9 375 aa15.3■□□□□ 0.04
PTPRF-207ENST00000436724 TCTAP57738 103 aa15.3■□□□□ 0.04
PTPRF-207ENST00000436724 SUMO2P61956 95 aaKnown RBP15.3■□□□□ 0.04
PTPRF-207ENST00000436724 M0R2P5 195 aa15.29■□□□□ 0.04
PTPRF-207ENST00000436724 ZNF56Q15929 161 aa15.29■□□□□ 0.04
PTPRF-207ENST00000436724 ERASQ7Z444 233 aa15.29■□□□□ 0.04
PTPRF-207ENST00000436724 TMEM158Q8WZ71 300 aa15.29■□□□□ 0.04
PTPRF-207ENST00000436724 IGHV3-73A0A0B4J1V6 119 aa15.28■□□□□ 0.04
PTPRF-207ENST00000436724 SMIM2Q9BVW6 85 aa15.28■□□□□ 0.04
PTPRF-207ENST00000436724 MRPL16Q9NX20 251 aaKnown RBP15.28■□□□□ 0.04
PTPRF-207ENST00000436724 WFDC9Q8NEX5 89 aa15.28■□□□□ 0.04
PTPRF-207ENST00000436724 ZMAT4Q9H898 229 aa15.28■□□□□ 0.04
PTPRF-207ENST00000436724 TMEM97Q5BJF2 176 aa15.27■□□□□ 0.04
PTPRF-207ENST00000436724 CSNK1G2-AS1Q8NCQ2 148 aa15.27■□□□□ 0.04
PTPRF-207ENST00000436724 NACAE9PAV3 2078 aa15.27■□□□□ 0.03
PTPRF-207ENST00000436724 ODF1Q14990 250 aa15.26■□□□□ 0.03
PTPRF-207ENST00000436724 NEGR1Q7Z3B1 354 aa15.26■□□□□ 0.03
PTPRF-207ENST00000436724 RNASE8Q8TDE3 154 aaKnown RBP15.26■□□□□ 0.03
PTPRF-207ENST00000436724 DEFB104AQ8WTQ1 72 aa15.26■□□□□ 0.03
PTPRF-207ENST00000436724 C20orf78Q9BR46 151 aa15.26■□□□□ 0.03
PTPRF-207ENST00000436724 VAMP3Q15836 100 aa15.25■□□□□ 0.03
PTPRF-207ENST00000436724 M0QY20 66 aa15.25■□□□□ 0.03
PTPRF-207ENST00000436724 PCP2Q8IVA1 136 aa15.25■□□□□ 0.03
PTPRF-207ENST00000436724 HHLA3Q9XRX5 114 aa15.25■□□□□ 0.03
PTPRF-207ENST00000436724 PKD1L1Q8TDX9 2849 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 NBEAL2Q6ZNJ1 2754 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 PRSS1P07477 247 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 MORN3Q6PF18 240 aaPredicted RBP15.24■□□□□ 0.03
PTPRF-207ENST00000436724 C3orf56Q8N813 242 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 C1QTNF4Q9BXJ3 329 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 LAGE3Q14657 143 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 SPXQ9BT56 116 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 CSTL1Q9H114 145 aa15.24■□□□□ 0.03
PTPRF-207ENST00000436724 SIVA1O15304 175 aa15.23■□□□□ 0.03
PTPRF-207ENST00000436724 COL6A5A8TX70 2615 aa15.23■□□□□ 0.03
PTPRF-207ENST00000436724 PPP1R17O96001 155 aa15.22■□□□□ 0.03
PTPRF-207ENST00000436724 NMUP48645 174 aa15.22■□□□□ 0.03
PTPRF-207ENST00000436724 CFAP126Q5VTH2 177 aa15.22■□□□□ 0.03
PTPRF-207ENST00000436724 IL17DQ8TAD2 202 aa15.22■□□□□ 0.03
PTPRF-207ENST00000436724 TMEM263Q8WUH6 116 aaKnown RBP15.22■□□□□ 0.03
PTPRF-207ENST00000436724 A8MWV9 139 aa15.22■□□□□ 0.03
PTPRF-207ENST00000436724 UFSP1Q6NVU6 142 aa15.22■□□□□ 0.03
PTPRF-207ENST00000436724 SEC11AP67812 179 aa15.21■□□□□ 0.03
PTPRF-207ENST00000436724 P0DMU3 169 aa15.21■□□□□ 0.02
PTPRF-207ENST00000436724 FAM231AP0DMU4 169 aa15.21■□□□□ 0.02
PTPRF-207ENST00000436724 FAM231CP0DMU5 169 aa15.21■□□□□ 0.02
PTPRF-207ENST00000436724 PTH2Q96A98 100 aa15.21■□□□□ 0.02
PTPRF-207ENST00000436724 IGKV2D-26A0A0A0MRZ7 120 aa15.2■□□□□ 0.02
PTPRF-207ENST00000436724 TRGV1A0A0A0MS02 117 aa15.2■□□□□ 0.02
PTPRF-207ENST00000436724 ATP5LO75964 103 aa15.2■□□□□ 0.02
PTPRF-207ENST00000436724 PIK3CD-AS1Q5SR53 167 aa15.2■□□□□ 0.02
PTPRF-207ENST00000436724 Q6ZSN1 163 aa15.2■□□□□ 0.02
PTPRF-207ENST00000436724 SDHAF1A6NFY7 115 aa15.19■□□□□ 0.02
PTPRF-207ENST00000436724 IGKCP01834 107 aa15.19■□□□□ 0.02
PTPRF-207ENST00000436724 POLR2KP53803 58 aaKnown RBP15.19■□□□□ 0.02
PTPRF-207ENST00000436724 AMMECR1LQ6DCA0 310 aa15.19■□□□□ 0.02
PTPRF-207ENST00000436724 Q9UF83 564 aa15.19■□□□□ 0.02
PTPRF-207ENST00000436724 PLAC8L1A1L4L8 177 aa15.19■□□□□ 0.02
PTPRF-207ENST00000436724 Q6ZTI0 123 aa15.19■□□□□ 0.02
PTPRF-207ENST00000436724 NOP10Q9NPE3 64 aaKnown RBP15.19■□□□□ 0.02
PTPRF-207ENST00000436724 TRAV8-6A0A0B4J262 113 aa15.18■□□□□ 0.02
PTPRF-207ENST00000436724 OXLD1Q5BKU9 147 aa15.18■□□□□ 0.02
PTPRF-207ENST00000436724 OR4C5Q8NGB2 326 aa15.18■□□□□ 0.02
PTPRF-207ENST00000436724 HSD52Q0P140 79 aa15.18■□□□□ 0.02
PTPRF-207ENST00000436724 RRN3P1Q2M238 152 aa15.17■□□□□ 0.02
PTPRF-207ENST00000436724 TRBV6-5A0A0K0K1A5 114 aa15.17■□□□□ 0.02
PTPRF-207ENST00000436724 WIPF1O43516 503 aa15.17■□□□□ 0.02
PTPRF-207ENST00000436724 DPM2O94777 84 aa15.17■□□□□ 0.02
PTPRF-207ENST00000436724 K7EP13 123 aa15.16■□□□□ 0.02
PTPRF-207ENST00000436724 C16orf74Q96GX8 76 aa15.16■□□□□ 0.02
PTPRF-207ENST00000436724 TTTY13Q9BZ97 58 aa15.16■□□□□ 0.02
PTPRF-207ENST00000436724 RS1O15537 224 aa15.15■□□□□ 0.02
PTPRF-207ENST00000436724 ORMDL2Q53FV1 153 aa15.15■□□□□ 0.02
PTPRF-207ENST00000436724 SHISA2Q6UWI4 295 aa15.15■□□□□ 0.02
PTPRF-207ENST00000436724 MRPL35Q9NZE8 188 aaKnown RBP15.15■□□□□ 0.02
PTPRF-207ENST00000436724 TRBV27A0A0K0K1C4 114 aa15.14■□□□□ 0.01
PTPRF-207ENST00000436724 VCYO14598 125 aa15.14■□□□□ 0.01
PTPRF-207ENST00000436724 RPL32P62910 135 aaKnown RBP15.14■□□□□ 0.01
PTPRF-207ENST00000436724 ZC2HC1BQ5TFG8 222 aa15.14■□□□□ 0.01
PTPRF-207ENST00000436724 H3BRM9 83 aa15.14■□□□□ 0.01
PTPRF-207ENST00000436724 IGHV3-53P01767 116 aa15.14■□□□□ 0.01
PTPRF-207ENST00000436724 ZNF479Q96JC4 524 aa15.14■□□□□ 0.01
PTPRF-207ENST00000436724 A0A087WX48 190 aa15.13■□□□□ 0.01
PTPRF-207ENST00000436724 EMP1P54849 157 aa15.13■□□□□ 0.01
PTPRF-207ENST00000436724 DAZ2Q13117 558 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms