RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DKK2Q9UBU2 259 aa11.77□□□□□ -0.52
NEDD4-202ENST00000435532 ABCA1O95477 2261 aa11.77□□□□□ -0.53
NEDD4-202ENST00000435532 H7C423 109 aa11.77□□□□□ -0.53
NEDD4-202ENST00000435532 SIVA1O15304 175 aa11.77□□□□□ -0.53
NEDD4-202ENST00000435532 CCL25O15444 150 aa11.77□□□□□ -0.53
NEDD4-202ENST00000435532 TIMM17AQ99595 171 aa11.77□□□□□ -0.53
NEDD4-202ENST00000435532 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
NEDD4-202ENST00000435532 CEND1Q8N111 149 aa11.76□□□□□ -0.53
NEDD4-202ENST00000435532 LRP4O75096 1905 aa11.76□□□□□ -0.53
NEDD4-202ENST00000435532 DSCAMO60469 2012 aa11.76□□□□□ -0.53
NEDD4-202ENST00000435532 SMR3AQ99954 134 aa11.76□□□□□ -0.53
NEDD4-202ENST00000435532 Q6ZVH6 145 aa11.76□□□□□ -0.53
NEDD4-202ENST00000435532 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
NEDD4-202ENST00000435532 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
NEDD4-202ENST00000435532 TOMM6Q96B49 74 aa11.75□□□□□ -0.53
NEDD4-202ENST00000435532 B9D2Q9BPU9 175 aa11.75□□□□□ -0.53
NEDD4-202ENST00000435532 A0A0J9YXV3 536 aa11.75□□□□□ -0.53
NEDD4-202ENST00000435532 ORMDL1Q9P0S3 153 aa11.75□□□□□ -0.53
NEDD4-202ENST00000435532 IGLV1-40P01703 118 aa11.74□□□□□ -0.53
NEDD4-202ENST00000435532 ZFAND3Q9H8U3 227 aa11.74□□□□□ -0.53
NEDD4-202ENST00000435532 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
NEDD4-202ENST00000435532 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
NEDD4-202ENST00000435532 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
NEDD4-202ENST00000435532 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
NEDD4-202ENST00000435532 REG3AQ06141 175 aa11.73□□□□□ -0.53
NEDD4-202ENST00000435532 FUSP35637 526 aaKnown RBP eCLIP11.73□□□□□ -0.53
NEDD4-202ENST00000435532 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
NEDD4-202ENST00000435532 C16orf95Q9H693 158 aa11.72□□□□□ -0.53
NEDD4-202ENST00000435532 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
NEDD4-202ENST00000435532 SIGMAR1Q99720 223 aa11.71□□□□□ -0.53
NEDD4-202ENST00000435532 H0YGX0 51 aa11.71□□□□□ -0.53
NEDD4-202ENST00000435532 GTSF1Q8WW33 167 aa11.71□□□□□ -0.53
NEDD4-202ENST00000435532 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
NEDD4-202ENST00000435532 P0DMU3 169 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 FAM231AP0DMU4 169 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 FAM231CP0DMU5 169 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 BRWD1-AS2P59051 145 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 C20orf173Q96LM9 149 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 IGHV4-4A0A075B6R2 117 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 TP53TG3Q9ULZ0 132 aa11.71□□□□□ -0.54
NEDD4-202ENST00000435532 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
NEDD4-202ENST00000435532 C20orf203Q8NBC4 194 aa11.7□□□□□ -0.54
NEDD4-202ENST00000435532 ZNF295-AS1Q8N0V1 137 aa11.7□□□□□ -0.54
NEDD4-202ENST00000435532 TRBV6-4A0A1B0GX49 114 aa11.7□□□□□ -0.54
NEDD4-202ENST00000435532 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
NEDD4-202ENST00000435532 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 C11orf1Q9H5F2 150 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 NDUFS5O43920 106 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 HAMPP81172 84 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 NCR3O14931 201 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 LY6G6CO95867 125 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 ZFAND6Q6FIF0 208 aa11.69□□□□□ -0.54
NEDD4-202ENST00000435532 OPRPNQ99935 248 aaPredicted RBP11.69□□□□□ -0.54
NEDD4-202ENST00000435532 CRIP3Q6Q6R5 217 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 ZFAND2AQ8N6M9 145 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 C19orf71A6NCJ1 209 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 CARD19Q96LW7 228 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 UFSP1Q6NVU6 142 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 C7orf33Q8WU49 177 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 NDUFB1O75438 58 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 AVPP01185 164 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 ANAPC13Q9BS18 74 aa11.68□□□□□ -0.54
NEDD4-202ENST00000435532 RS1O15537 224 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 CFC1BP0CG36 223 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 CFC1P0CG37 223 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 DIRC1Q969H9 104 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 NCOR2Q9Y618 2525 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 C11orf86A6NJI1 115 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 MED12LQ86YW9 2145 aa11.67□□□□□ -0.54
NEDD4-202ENST00000435532 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
NEDD4-202ENST00000435532 ANKHD1Q8IWZ3 2542 aaKnown RBP11.66□□□□□ -0.54
NEDD4-202ENST00000435532 OXLD1Q5BKU9 147 aa11.66□□□□□ -0.54
NEDD4-202ENST00000435532 IGHV1-58A0A0C4DH39 117 aa11.66□□□□□ -0.54
NEDD4-202ENST00000435532 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
NEDD4-202ENST00000435532 ZNF124Q15973 351 aa11.66□□□□□ -0.54
NEDD4-202ENST00000435532 Q6ZPA2 131 aa11.66□□□□□ -0.54
NEDD4-202ENST00000435532 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.54
NEDD4-202ENST00000435532 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
NEDD4-202ENST00000435532 ARHGAP21Q5T5U3 1957 aa11.65□□□□□ -0.54
NEDD4-202ENST00000435532 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
NEDD4-202ENST00000435532 IGHV4-30-4P0DP06 118 aa11.64□□□□□ -0.55
NEDD4-202ENST00000435532 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
NEDD4-202ENST00000435532 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
NEDD4-202ENST00000435532 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
NEDD4-202ENST00000435532 MED13LQ71F56 2210 aa11.63□□□□□ -0.55
NEDD4-202ENST00000435532 KPRPQ5T749 579 aaPredicted RBP11.63□□□□□ -0.55
NEDD4-202ENST00000435532 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
NEDD4-202ENST00000435532 Q6ZUT4 128 aa11.63□□□□□ -0.55
NEDD4-202ENST00000435532 TINCRA0A1B0GVN0 87 aa11.62□□□□□ -0.55
NEDD4-202ENST00000435532 CITED1Q99966 193 aa11.62□□□□□ -0.55
NEDD4-202ENST00000435532 FREM1Q5H8C1 2179 aa11.62□□□□□ -0.55
NEDD4-202ENST00000435532 Q6ZS46 218 aa11.62□□□□□ -0.55
NEDD4-202ENST00000435532 TRBV6-8A0A0A6YYG3 113 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms