RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 ATRAIDQ6UW56 229 aa11.76□□□□□ -0.53
CPNE1-213ENST00000434795 SLC51BQ86UW2 128 aa11.76□□□□□ -0.53
CPNE1-213ENST00000434795 UBE2WQ96B02 151 aa11.76□□□□□ -0.53
CPNE1-213ENST00000434795 DAZAP1Q96EP5 407 aaKnown RBP11.76□□□□□ -0.53
CPNE1-213ENST00000434795 IGKV2D-24A0A075B6R9 120 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 PDE6DO43924 150 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
CPNE1-213ENST00000434795 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-213ENST00000434795 ENHOQ6UWT2 76 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 Q6ZNX1 250 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 NTM-AS1Q6ZSK4 140 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 Q8N976 141 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 SMIM12Q96EX1 92 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 MED9Q9NWA0 146 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
CPNE1-213ENST00000434795 TRBV20OR9-2A0A075B6H5 130 aa11.74□□□□□ -0.53
CPNE1-213ENST00000434795 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
CPNE1-213ENST00000434795 GNG4P50150 75 aa11.74□□□□□ -0.53
CPNE1-213ENST00000434795 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
CPNE1-213ENST00000434795 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-213ENST00000434795 FAM229AH3BQW9 127 aa11.73□□□□□ -0.53
CPNE1-213ENST00000434795 M0QY20 66 aa11.73□□□□□ -0.53
CPNE1-213ENST00000434795 Q0VG73 95 aa11.73□□□□□ -0.53
CPNE1-213ENST00000434795 Q6ZSA8 131 aa11.73□□□□□ -0.53
CPNE1-213ENST00000434795 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
CPNE1-213ENST00000434795 BCL2P10415 239 aa11.72□□□□□ -0.53
CPNE1-213ENST00000434795 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-213ENST00000434795 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
CPNE1-213ENST00000434795 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
CPNE1-213ENST00000434795 F2Z2F3 143 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 IFNA1P01562 189 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 CACNG7P62955 275 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 MPV17L2Q567V2 206 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 C15orf54Q8N8G6 183 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.53
CPNE1-213ENST00000434795 HERC1Q15751 4861 aa11.7□□□□□ -0.54
CPNE1-213ENST00000434795 P01737 135 aa11.7□□□□□ -0.54
CPNE1-213ENST00000434795 LYZL1Q6UWQ5 148 aa11.7□□□□□ -0.54
CPNE1-213ENST00000434795 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
CPNE1-213ENST00000434795 NUDT11Q96G61 164 aa11.7□□□□□ -0.54
CPNE1-213ENST00000434795 XKRY2A2RUG3 117 aa11.69□□□□□ -0.54
CPNE1-213ENST00000434795 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
CPNE1-213ENST00000434795 WDR73Q6P4I2 378 aa11.69□□□□□ -0.54
CPNE1-213ENST00000434795 BIN3Q9NQY0 253 aa11.69□□□□□ -0.54
CPNE1-213ENST00000434795 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
CPNE1-213ENST00000434795 NTF3P20783 257 aa11.68□□□□□ -0.54
CPNE1-213ENST00000434795 TAGLN2P37802 199 aaKnown RBP11.68□□□□□ -0.54
CPNE1-213ENST00000434795 PKIAP61925 76 aa11.68□□□□□ -0.54
CPNE1-213ENST00000434795 SUMO4Q6EEV6 95 aa11.68□□□□□ -0.54
CPNE1-213ENST00000434795 OCC1Q8TAD7 63 aa11.68□□□□□ -0.54
CPNE1-213ENST00000434795 C1orf43Q9BWL3 253 aa11.68□□□□□ -0.54
CPNE1-213ENST00000434795 FLG2Q5D862 2391 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-213ENST00000434795 MGPP08493 103 aa11.67□□□□□ -0.54
CPNE1-213ENST00000434795 RBX1P62877 108 aa11.67□□□□□ -0.54
CPNE1-213ENST00000434795 GAGE6Q13070 117 aa11.67□□□□□ -0.54
CPNE1-213ENST00000434795 IQCJQ1A5X6 159 aa11.67□□□□□ -0.54
CPNE1-213ENST00000434795 PRR34Q9NV39 138 aa11.67□□□□□ -0.54
CPNE1-213ENST00000434795 MYCBP2O75592 4640 aa11.67□□□□□ -0.54
CPNE1-213ENST00000434795 H7C1H1 209 aa11.66□□□□□ -0.54
CPNE1-213ENST00000434795 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
CPNE1-213ENST00000434795 K7EN84 100 aa11.65□□□□□ -0.54
CPNE1-213ENST00000434795 MIAQ16674 131 aa11.65□□□□□ -0.54
CPNE1-213ENST00000434795 KRTAP26-1Q6PEX3 210 aa11.65□□□□□ -0.54
CPNE1-213ENST00000434795 RASL11AQ6T310 242 aa11.65□□□□□ -0.54
CPNE1-213ENST00000434795 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-213ENST00000434795 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 CRPP02741 224 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 NKX2-5P52952 324 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-213ENST00000434795 AKAP14Q86UN6 197 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 LINC00269Q8N2A0 174 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 LYPD6BQ8NI32 183 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 RNASE7Q9H1E1 156 aaKnown RBP11.64□□□□□ -0.55
CPNE1-213ENST00000434795 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
CPNE1-213ENST00000434795 CTRLP40313 264 aa11.63□□□□□ -0.55
CPNE1-213ENST00000434795 BLOC1S1P78537 153 aa11.63□□□□□ -0.55
CPNE1-213ENST00000434795 TWIST1Q15672 202 aa11.62□□□□□ -0.55
CPNE1-213ENST00000434795 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
CPNE1-213ENST00000434795 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
CPNE1-213ENST00000434795 RPP21Q9H633 154 aaKnown RBP11.62□□□□□ -0.55
CPNE1-213ENST00000434795 A0A1B0GUV1 79 aa11.61□□□□□ -0.55
CPNE1-213ENST00000434795 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
CPNE1-213ENST00000434795 SCXQ7RTU7 201 aa11.61□□□□□ -0.55
CPNE1-213ENST00000434795 GTSF1Q8WW33 167 aa11.61□□□□□ -0.55
CPNE1-213ENST00000434795 CHAC1Q9BUX1 264 aa11.61□□□□□ -0.55
CPNE1-213ENST00000434795 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 TMEM250H0YL14 139 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 PRSS1P07477 247 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 C20orf203Q8NBC4 194 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 PGLYRP4Q96LB8 373 aa11.6□□□□□ -0.55
CPNE1-213ENST00000434795 PLA2G1BP04054 148 aaKnown RBP11.59□□□□□ -0.55
CPNE1-213ENST00000434795 CLPSL2Q6UWE3 100 aa11.59□□□□□ -0.55
CPNE1-213ENST00000434795 GATD1Q8NB37 220 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms