RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ALKAL2Q6UX46 152 aa8.25□□□□□ -1.09
SMPD4-204ENST00000430682 FER1L6-AS1Q8NA97 138 aa8.25□□□□□ -1.09
SMPD4-204ENST00000430682 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
SMPD4-204ENST00000430682 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
SMPD4-204ENST00000430682 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
SMPD4-204ENST00000430682 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
SMPD4-204ENST00000430682 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 F5H697 171 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 TEX46H3BTG2 121 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 MPV17L2Q567V2 206 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 OCC1Q8TAD7 63 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 TM2D2Q9BX73 214 aa8.24□□□□□ -1.09
SMPD4-204ENST00000430682 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 M0QY20 66 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 IFNA1P01562 189 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 NKX2-5P52952 324 aaPredicted RBP8.23□□□□□ -1.09
SMPD4-204ENST00000430682 LINC01620Q4KN68 170 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 SUMO4Q6EEV6 95 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 ENHOQ6UWT2 76 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 NTN5Q8WTR8 489 aaPredicted RBP8.23□□□□□ -1.09
SMPD4-204ENST00000430682 UBE2WQ96B02 151 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 DAZAP1Q96EP5 407 aaKnown RBP8.23□□□□□ -1.09
SMPD4-204ENST00000430682 SMIM12Q96EX1 92 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 AP1S3Q96PC3 154 aa8.23□□□□□ -1.09
SMPD4-204ENST00000430682 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
SMPD4-204ENST00000430682 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 A0A087WX48 190 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 P01737 135 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 MGPP08493 103 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 RPS20P60866 119 aaKnown RBP8.22□□□□□ -1.09
SMPD4-204ENST00000430682 ATRAIDQ6UW56 229 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 Q8N976 141 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 LYPD6BQ8NI32 183 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 DEFB104AQ8WTQ1 72 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 RNASE7Q9H1E1 156 aaKnown RBP8.22□□□□□ -1.09
SMPD4-204ENST00000430682 URGCP-MRPS24S4R325 110 aa8.22□□□□□ -1.09
SMPD4-204ENST00000430682 EPM2AB3EWF7 344 aa8.21□□□□□ -1.1
SMPD4-204ENST00000430682 TMEM262E9PQX1 116 aa8.21□□□□□ -1.1
SMPD4-204ENST00000430682 NTF3P20783 257 aa8.21□□□□□ -1.1
SMPD4-204ENST00000430682 TOR2AQ5JU69 321 aa8.21□□□□□ -1.1
SMPD4-204ENST00000430682 Q5VSD8 79 aa8.21□□□□□ -1.1
SMPD4-204ENST00000430682 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
SMPD4-204ENST00000430682 SMIM17P0DL12 118 aa8.2□□□□□ -1.1
SMPD4-204ENST00000430682 CTRLP40313 264 aa8.2□□□□□ -1.1
SMPD4-204ENST00000430682 CACNG7P62955 275 aa8.2□□□□□ -1.1
SMPD4-204ENST00000430682 C15orf54Q8N8G6 183 aa8.2□□□□□ -1.1
SMPD4-204ENST00000430682 GTSF1Q8WW33 167 aa8.2□□□□□ -1.1
SMPD4-204ENST00000430682 TMEM70Q9BUB7 260 aa8.2□□□□□ -1.1
SMPD4-204ENST00000430682 FOXA3P55318 350 aaPredicted RBP8.19□□□□□ -1.1
SMPD4-204ENST00000430682 GAGE6Q13070 117 aa8.19□□□□□ -1.1
SMPD4-204ENST00000430682 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
SMPD4-204ENST00000430682 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
SMPD4-204ENST00000430682 DMBT1Q9UGM3 2413 aaPredicted RBP8.19□□□□□ -1.1
SMPD4-204ENST00000430682 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
SMPD4-204ENST00000430682 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
SMPD4-204ENST00000430682 F2Z2F3 143 aa8.18□□□□□ -1.1
SMPD4-204ENST00000430682 RBX1P62877 108 aa8.18□□□□□ -1.1
SMPD4-204ENST00000430682 BLOC1S1P78537 153 aa8.18□□□□□ -1.1
SMPD4-204ENST00000430682 Q6ZSA8 131 aa8.18□□□□□ -1.1
SMPD4-204ENST00000430682 CNFNQ9BYD5 112 aa8.18□□□□□ -1.1
SMPD4-204ENST00000430682 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
SMPD4-204ENST00000430682 ANGP03950 147 aaKnown RBP8.17□□□□□ -1.1
SMPD4-204ENST00000430682 TAGLN2P37802 199 aaKnown RBP8.17□□□□□ -1.1
SMPD4-204ENST00000430682 ELOBQ15370 118 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 IQCJQ1A5X6 159 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 WDR73Q6P4I2 378 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 RMI2Q96E14 147 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 GFRA4Q9GZZ7 299 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 COX11Q9Y6N1 276 aa8.17□□□□□ -1.1
SMPD4-204ENST00000430682 TRAV26-2A0A0B4J265 109 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 LINC00269Q8N2A0 174 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 FRZBQ92765 325 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 BIN3Q9NQY0 253 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 PRR34Q9NV39 138 aa8.16□□□□□ -1.1
SMPD4-204ENST00000430682 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 TRGC1P0CF51 173 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 INAFM2P0DMQ5 153 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 CEBPGP53567 150 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 Q0VG73 95 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 TWIST1Q15672 202 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 KCNIP4Q6PIL6 250 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 C20orf203Q8NBC4 194 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 NIT2Q9NQR4 276 aa8.15□□□□□ -1.1
SMPD4-204ENST00000430682 IGLV4-60A0A075B6I1 120 aa8.14□□□□□ -1.11
SMPD4-204ENST00000430682 IGHV1-24A0A0C4DH33 117 aa8.14□□□□□ -1.11
SMPD4-204ENST00000430682 H7C1H1 209 aa8.14□□□□□ -1.11
SMPD4-204ENST00000430682 GATCO43716 136 aaKnown RBP8.14□□□□□ -1.11
SMPD4-204ENST00000430682 GAS8-AS1O95177 125 aa8.14□□□□□ -1.11
SMPD4-204ENST00000430682 SRP19P09132 144 aaKnown RBP8.14□□□□□ -1.11
SMPD4-204ENST00000430682 TMEM97Q5BJF2 176 aa8.14□□□□□ -1.11
SMPD4-204ENST00000430682 FAM231DQ6ZW35 169 aa8.14□□□□□ -1.11
SMPD4-204ENST00000430682 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
SMPD4-204ENST00000430682 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms