RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 Q6ZS46 218 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 C5orf56Q8N8D9 126 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 MRPL53Q96EL3 112 aaKnown RBP6.13□□□□□ -1.43
HPS4-205ENST00000429411 IGHV1-69DA0A0B4J2H0 117 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 IGHV1-69P01742 117 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 IGHV4-39P01824 125 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 HERVK_113P61574 105 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 LMO4P61968 165 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 SPINK13Q1W4C9 94 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 ORMDL2Q53FV1 153 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 KNCNA6PVL3 124 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 CLPSL1A2RUU4 121 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 DUSP14O95147 198 aaKnown RBP6.12□□□□□ -1.43
HPS4-205ENST00000429411 RPL39P62891 51 aaKnown RBP6.12□□□□□ -1.43
HPS4-205ENST00000429411 WFDC2Q14508 124 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 C11orf71Q6IPW1 123 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 CEND1Q8N111 149 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 OR5A1Q8NGJ0 315 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 F8VRH5 84 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 OVOL1O14753 267 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 HLA-DRB4P13762 266 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 Q8N6K4 173 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 U3KQK5 164 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 HLA-DRB4X5D2U9 266 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 A0A087WX48 190 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 PRSS29PA6NIE9 313 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 PLNP26678 52 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 SYNJ2BPP57105 145 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 NPC2P61916 151 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 C10orf99Q6UWK7 81 aa6.12□□□□□ -1.43
HPS4-205ENST00000429411 LINC01549A6NIU2 74 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 HOXA3O43365 443 aaPredicted RBP6.11□□□□□ -1.43
HPS4-205ENST00000429411 RNASE13Q5GAN3 156 aaKnown RBP6.11□□□□□ -1.43
HPS4-205ENST00000429411 LGALS3P17931 250 aaKnown RBP6.11□□□□□ -1.43
HPS4-205ENST00000429411 C4orf26Q17RF5 130 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 C12orf74Q32Q52 190 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 AJUBAQ96IF1 538 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 IGHV4-30-2A0A087WSY4 118 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 IGHV7-4-1A0A0J9YVY3 117 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 GAGE13Q4V321 117 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 GATD1Q8NB37 220 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 OPRPNQ99935 248 aaPredicted RBP6.11□□□□□ -1.43
HPS4-205ENST00000429411 C1QTNF4Q9BXJ3 329 aa6.11□□□□□ -1.43
HPS4-205ENST00000429411 DAZ1Q9NQZ3 744 aaKnown RBP6.11□□□□□ -1.43
HPS4-205ENST00000429411 TRAV2A0A0B4J234 112 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 FAM223BA6NKX1 122 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 FAM223AQ8IWN6 122 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 DUX3Q96PT4 197 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 HHLA3Q9XRX5 114 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 MYMXA0A1B0GTQ4 84 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 SDHAF1A6NFY7 115 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 SNRPD3P62318 126 aaKnown RBP6.1□□□□□ -1.43
HPS4-205ENST00000429411 TAL2Q16559 108 aa6.1□□□□□ -1.43
HPS4-205ENST00000429411 NSD1Q96L73 2696 aaPredicted RBP6.1□□□□□ -1.43
HPS4-205ENST00000429411 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 IGHV4-59P01825 116 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 EBI3Q14213 229 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 DEFB113Q30KQ7 82 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 C9orf47Q6ZRZ4 202 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 RASL10AQ92737 203 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 VPS13CQ709C8 3753 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 IGLL5B9A064 214 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 NDUFA4O00483 81 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 ZNF876PQ49A33 203 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 NRACQ8N912 160 aa6.09□□□□□ -1.43
HPS4-205ENST00000429411 DEFB136Q30KP8 78 aa6.09□□□□□ -1.44
HPS4-205ENST00000429411 SPATA25Q9BR10 227 aa6.09□□□□□ -1.44
HPS4-205ENST00000429411 ERG28Q9UKR5 140 aa6.09□□□□□ -1.44
HPS4-205ENST00000429411 GAGE12HA6NDE8 117 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 H3BS24 57 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 ZFAND2AQ8N6M9 145 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 SYT8Q8NBV8 401 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 PRM2P04554 102 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 MSMBP08118 114 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 PLEKHB2Q96CS7 222 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 MDFICQ9P1T7 246 aa6.08□□□□□ -1.44
HPS4-205ENST00000429411 FAM19A5Q7Z5A7 132 aaPredicted RBP6.07□□□□□ -1.44
HPS4-205ENST00000429411 TMEM190Q8WZ59 177 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 IGHV3-16A0A0C4DH30 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 GAGE12JA6NER3 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 C11orf86A6NJI1 115 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 GAGE7O76087 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 GAGE4Q13068 117 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 SUMO4Q6EEV6 95 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 PHLDA1Q8WV24 401 aaPredicted RBP6.07□□□□□ -1.44
HPS4-205ENST00000429411 USMG5Q96IX5 58 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 NOTCH1P46531 2555 aa6.07□□□□□ -1.44
HPS4-205ENST00000429411 IGHV3-38A0A0C4DH36 116 aa6.06□□□□□ -1.44
HPS4-205ENST00000429411 VCYO14598 125 aa6.06□□□□□ -1.44
HPS4-205ENST00000429411 LOC107984640A0A0U1RRK4 108 aa6.06□□□□□ -1.44
HPS4-205ENST00000429411 DEFB112Q30KQ8 113 aa6.06□□□□□ -1.44
HPS4-205ENST00000429411 DYNLRB2Q8TF09 96 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms