RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TRBV27A0A0K0K1C4 114 aa15.79■□□□□ 0.12
CNEP1R1-202ENST00000427478 C2CD3Q4AC94 2353 aa15.78■□□□□ 0.12
CNEP1R1-202ENST00000427478 PIK3CD-AS1Q5SR53 167 aa15.78■□□□□ 0.12
CNEP1R1-202ENST00000427478 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.78■□□□□ 0.12
CNEP1R1-202ENST00000427478 PTH2Q96A98 100 aa15.78■□□□□ 0.12
CNEP1R1-202ENST00000427478 ZMAT4Q9H898 229 aa15.78■□□□□ 0.12
CNEP1R1-202ENST00000427478 MRPS16Q9Y3D3 137 aaKnown RBP15.77■□□□□ 0.12
CNEP1R1-202ENST00000427478 A0A1B0GV90 55 aa15.77■□□□□ 0.11
CNEP1R1-202ENST00000427478 IGKCP01834 107 aa15.77■□□□□ 0.11
CNEP1R1-202ENST00000427478 GIG44P09565 113 aaPredicted RBP15.77■□□□□ 0.11
CNEP1R1-202ENST00000427478 CFAP126Q5VTH2 177 aa15.77■□□□□ 0.11
CNEP1R1-202ENST00000427478 UFSP1Q6NVU6 142 aa15.77■□□□□ 0.11
CNEP1R1-202ENST00000427478 COX8AP10176 69 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 MRPL35Q9NZE8 188 aaKnown RBP15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 CYSLTR1Q9Y271 337 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 A0A087WX48 190 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 H7C1H1 209 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 DPM2O94777 84 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 P0DMU3 169 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 FAM231AP0DMU4 169 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 FAM231CP0DMU5 169 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 TP53TG1Q9Y2A0 90 aa15.76■□□□□ 0.11
CNEP1R1-202ENST00000427478 SPATA3Q8NHX4 192 aa15.75■□□□□ 0.11
CNEP1R1-202ENST00000427478 RNASE8Q8TDE3 154 aaKnown RBP15.74■□□□□ 0.11
CNEP1R1-202ENST00000427478 ERASQ7Z444 233 aa15.74■□□□□ 0.11
CNEP1R1-202ENST00000427478 EDA2RQ9HAV5 297 aa15.74■□□□□ 0.11
CNEP1R1-202ENST00000427478 G0S2P27469 103 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 RPL39P62891 51 aaKnown RBP15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 IL17DQ8TAD2 202 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 BAALCQ8WXS3 180 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 HHLA3Q9XRX5 114 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 TRAV12-1A0A0B4J245 112 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 Q6ZSN1 163 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 NEXN-AS1Q8NBZ9 246 aa15.73■□□□□ 0.11
CNEP1R1-202ENST00000427478 RIPPLY3P57055 190 aa15.72■□□□□ 0.11
CNEP1R1-202ENST00000427478 I3L3M4 83 aa15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 RHODO00212 210 aa15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 TSHBP01222 138 aa15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 NMUP48645 174 aa15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 HINT1P49773 126 aaPredicted RBP15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 TMEM263Q8WUH6 116 aaKnown RBP15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 TRGV1A0A0A0MS02 117 aa15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 RS1O15537 224 aa15.71■□□□□ 0.11
CNEP1R1-202ENST00000427478 JMJD1CQ15652 2540 aa15.71■□□□□ 0.1
CNEP1R1-202ENST00000427478 FGF6P10767 208 aa15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 CHTOPQ9Y3Y2 248 aaKnown RBP15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 F8VRH5 84 aa15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 ZC2HC1BQ5TFG8 222 aa15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 CITED1Q99966 193 aa15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 C1QTNF4Q9BXJ3 329 aa15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 Q9UF83 564 aa15.7■□□□□ 0.1
CNEP1R1-202ENST00000427478 RHOHQ15669 191 aa15.69■□□□□ 0.1
CNEP1R1-202ENST00000427478 GTSCR1Q86UQ5 136 aa15.69■□□□□ 0.1
CNEP1R1-202ENST00000427478 IGIPA6NJ69 53 aa15.68■□□□□ 0.1
CNEP1R1-202ENST00000427478 PLNP26678 52 aa15.68■□□□□ 0.1
CNEP1R1-202ENST00000427478 TNFRSF18Q9Y5U5 241 aa15.68■□□□□ 0.1
CNEP1R1-202ENST00000427478 LINC01549A6NIU2 74 aa15.68■□□□□ 0.1
CNEP1R1-202ENST00000427478 C9orf66Q5T8R8 295 aa15.68■□□□□ 0.1
CNEP1R1-202ENST00000427478 CSNK1G2-AS1Q8NCQ2 148 aa15.68■□□□□ 0.1
CNEP1R1-202ENST00000427478 IGKV2D-26A0A0A0MRZ7 120 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 C2orf91Q6ZV80 131 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 PCP2Q8IVA1 136 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 PRSS29PA6NIE9 313 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 IGHV3-53P01767 116 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 INSL3P51460 131 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 Q6ZTI0 123 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 BOD1L2Q8IYS8 172 aa15.67■□□□□ 0.1
CNEP1R1-202ENST00000427478 OR4C5Q8NGB2 326 aa15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 TIMM17AQ99595 171 aa15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 NOP10Q9NPE3 64 aaKnown RBP15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 MPV17L2Q567V2 206 aa15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 COL5A1-AS1Q5SY13 56 aa15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 C16orf74Q96GX8 76 aa15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 TMEM141Q96I45 108 aa15.65■□□□□ 0.1
CNEP1R1-202ENST00000427478 C20orf203Q8NBC4 194 aa15.64■□□□□ 0.09
CNEP1R1-202ENST00000427478 ZNF479Q96JC4 524 aa15.64■□□□□ 0.09
CNEP1R1-202ENST00000427478 PLAC8L1A1L4L8 177 aa15.63■□□□□ 0.09
CNEP1R1-202ENST00000427478 RRN3P1Q2M238 152 aa15.62■□□□□ 0.09
CNEP1R1-202ENST00000427478 DAZ2Q13117 558 aaKnown RBP15.62■□□□□ 0.09
CNEP1R1-202ENST00000427478 PMVKQ15126 192 aa15.62■□□□□ 0.09
CNEP1R1-202ENST00000427478 TTTY13Q9BZ97 58 aa15.62■□□□□ 0.09
CNEP1R1-202ENST00000427478 DLEU1O43261 78 aa15.61■□□□□ 0.09
CNEP1R1-202ENST00000427478 TENM1Q9UKZ4 2725 aa15.61■□□□□ 0.09
CNEP1R1-202ENST00000427478 DNAJC30Q96LL9 226 aa15.61■□□□□ 0.09
CNEP1R1-202ENST00000427478 OPRPNQ99935 248 aaPredicted RBP15.6■□□□□ 0.09
CNEP1R1-202ENST00000427478 CST9LQ9H4G1 147 aa15.6■□□□□ 0.09
CNEP1R1-202ENST00000427478 F8P00451 2351 aa15.6■□□□□ 0.09
CNEP1R1-202ENST00000427478 TRAV4A0A0B4J268 109 aa15.59■□□□□ 0.09
CNEP1R1-202ENST00000427478 IGHV3-38A0A0C4DH36 116 aa15.59■□□□□ 0.09
CNEP1R1-202ENST00000427478 PHLDA1Q8WV24 401 aaPredicted RBP15.59■□□□□ 0.09
CNEP1R1-202ENST00000427478 VWFP04275 2813 aa15.59■□□□□ 0.09
CNEP1R1-202ENST00000427478 EMP1P54849 157 aa15.59■□□□□ 0.09
CNEP1R1-202ENST00000427478 BVES-AS1Q5T3Y7 98 aa15.59■□□□□ 0.09
CNEP1R1-202ENST00000427478 C12orf54Q6X4T0 127 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 LURAP1LQ8IV03 231 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 IGLV4-69A0A075B6H9 119 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 GAGE12BA1L429 117 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 GAGE7O76087 117 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 GAGE12FP0CL80 117 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 GAGE12GP0CL81 117 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms