RNA–Protein interactions for RNA: ENST00000424387.5

TOM1-205, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-205ENST00000424387 VPREB3Q9UKI3 123 aa13.32□□□□□ -0.28
TOM1-205ENST00000424387 FLNCQ14315 2725 aa13.32□□□□□ -0.28
TOM1-205ENST00000424387 M0QY20 66 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 HERVK_113P61574 105 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 UBE2E2Q96LR5 201 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 SMCPP49901 116 aaPredicted RBP13.31□□□□□ -0.28
TOM1-205ENST00000424387 ZNF56Q15929 161 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
TOM1-205ENST00000424387 HOXD3P31249 432 aaPredicted RBP13.3□□□□□ -0.28
TOM1-205ENST00000424387 SCGB1D4Q6XE38 83 aa13.3□□□□□ -0.28
TOM1-205ENST00000424387 NFE4Q86UQ8 179 aa13.3□□□□□ -0.28
TOM1-205ENST00000424387 SBSPONQ8IVN8 264 aa13.3□□□□□ -0.28
TOM1-205ENST00000424387 MAPK1IP1LQ8NDC0 245 aa13.3□□□□□ -0.28
TOM1-205ENST00000424387 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
TOM1-205ENST00000424387 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
TOM1-205ENST00000424387 Q6YL49 198 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 TRPT1Q86TN4 253 aaKnown RBP13.29□□□□□ -0.28
TOM1-205ENST00000424387 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
TOM1-205ENST00000424387 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 M0QXV9 152 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 KLHL30-AS1Q8NEE0 82 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 PLEKHB2Q96CS7 222 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 FAM110AQ9BQ89 295 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 ZNF702PQ9H963 129 aa13.29□□□□□ -0.28
TOM1-205ENST00000424387 EMP1P54849 157 aa13.28□□□□□ -0.28
TOM1-205ENST00000424387 UBE2D3P61077 147 aa13.28□□□□□ -0.28
TOM1-205ENST00000424387 UBE2D2P62837 147 aa13.28□□□□□ -0.28
TOM1-205ENST00000424387 RHOHQ15669 191 aa13.28□□□□□ -0.28
TOM1-205ENST00000424387 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
TOM1-205ENST00000424387 IGSF10Q6WRI0 2623 aa13.27□□□□□ -0.28
TOM1-205ENST00000424387 UTP20O75691 2785 aaKnown RBP13.27□□□□□ -0.28
TOM1-205ENST00000424387 TRGV11A0A075B6L2 103 aa13.27□□□□□ -0.28
TOM1-205ENST00000424387 FSHBP01225 129 aa13.27□□□□□ -0.28
TOM1-205ENST00000424387 UBE2D1P51668 147 aa13.27□□□□□ -0.28
TOM1-205ENST00000424387 SS18L2Q9UHA2 77 aa13.27□□□□□ -0.28
TOM1-205ENST00000424387 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.29
TOM1-205ENST00000424387 SRSF9Q13242 221 aaKnown RBP eCLIP13.27□□□□□ -0.29
TOM1-205ENST00000424387 FHL3Q13643 280 aa13.27□□□□□ -0.29
TOM1-205ENST00000424387 NSUN5P1Q3KNT7 163 aa13.27□□□□□ -0.29
TOM1-205ENST00000424387 CITED1Q99966 193 aa13.26□□□□□ -0.29
TOM1-205ENST00000424387 ZNRF2Q8NHG8 242 aa13.25□□□□□ -0.29
TOM1-205ENST00000424387 RAX2Q96IS3 184 aa13.25□□□□□ -0.29
TOM1-205ENST00000424387 PIEZO1Q92508 2521 aa13.25□□□□□ -0.29
TOM1-205ENST00000424387 A8MWV9 139 aa13.25□□□□□ -0.29
TOM1-205ENST00000424387 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
TOM1-205ENST00000424387 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 A0A0J9YY99 117 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 I3L3M4 83 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 RHODO00212 210 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 P0DMU3 169 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 Q6Q795 121 aa13.24□□□□□ -0.29
TOM1-205ENST00000424387 BEX4Q9NWD9 120 aaPredicted RBP13.24□□□□□ -0.29
TOM1-205ENST00000424387 PSMB2P49721 201 aa13.23□□□□□ -0.29
TOM1-205ENST00000424387 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
TOM1-205ENST00000424387 IGHV4-31P0DP07 118 aa13.23□□□□□ -0.29
TOM1-205ENST00000424387 C20orf203Q8NBC4 194 aa13.23□□□□□ -0.29
TOM1-205ENST00000424387 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
TOM1-205ENST00000424387 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.29
TOM1-205ENST00000424387 GAGE12JA6NER3 117 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 GAGE7O76087 117 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 GAGE12FP0CL80 117 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 GAGE12GP0CL81 117 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 GAGE12IP0CL82 117 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 SLURP1P55000 103 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 TSPEAR-AS2P59090 65 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 GAGE4Q13068 117 aa13.21□□□□□ -0.29
TOM1-205ENST00000424387 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
TOM1-205ENST00000424387 B5MCH6 92 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 DEFB131AP59861 70 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 EDA2RQ9HAV5 297 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 LOC107984156A0A0G2JMH3 177 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 A8MTW9 85 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 J3QQQ9 107 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 ARL17AQ8IVW1 177 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 SLC25A29Q8N8R3 303 aa13.2□□□□□ -0.3
TOM1-205ENST00000424387 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
TOM1-205ENST00000424387 GAGE2EQ4V326 116 aa13.19□□□□□ -0.3
TOM1-205ENST00000424387 GAGE2DQ9UEU5 116 aa13.19□□□□□ -0.3
TOM1-205ENST00000424387 ANKRD17O75179 2603 aaKnown RBP13.19□□□□□ -0.3
TOM1-205ENST00000424387 NHLRC4P0CG21 123 aaPredicted RBP13.19□□□□□ -0.3
TOM1-205ENST00000424387 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
TOM1-205ENST00000424387 SHISA2Q6UWI4 295 aa13.19□□□□□ -0.3
TOM1-205ENST00000424387 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
TOM1-205ENST00000424387 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
TOM1-205ENST00000424387 H3BMM0 161 aa13.18□□□□□ -0.3
TOM1-205ENST00000424387 HTN1P15515 57 aa13.18□□□□□ -0.3
TOM1-205ENST00000424387 LGALS3P17931 250 aaKnown RBP13.18□□□□□ -0.3
TOM1-205ENST00000424387 AMELXQ99217 191 aa13.18□□□□□ -0.3
TOM1-205ENST00000424387 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
TOM1-205ENST00000424387 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
TOM1-205ENST00000424387 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
TOM1-205ENST00000424387 NDUFV3P56181 108 aaKnown RBP13.17□□□□□ -0.3
TOM1-205ENST00000424387 Q8N2B8 174 aa13.17□□□□□ -0.3
TOM1-205ENST00000424387 LEPROTO15243 131 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms