RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TIMM17BO60830 172 aa11.23□□□□□ -0.61
C9orf3-204ENST00000424143 GATA3P23771 443 aa11.23□□□□□ -0.61
C9orf3-204ENST00000424143 Q6Q795 121 aa11.23□□□□□ -0.61
C9orf3-204ENST00000424143 CITED1Q99966 193 aa11.23□□□□□ -0.61
C9orf3-204ENST00000424143 MED13LQ71F56 2210 aa11.22□□□□□ -0.61
C9orf3-204ENST00000424143 SRD5A1P18405 259 aa11.22□□□□□ -0.61
C9orf3-204ENST00000424143 SPTBN2O15020 2390 aa11.22□□□□□ -0.61
C9orf3-204ENST00000424143 ATMQ13315 3056 aa11.21□□□□□ -0.61
C9orf3-204ENST00000424143 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
C9orf3-204ENST00000424143 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.61
C9orf3-204ENST00000424143 LINC01620Q4KN68 170 aa11.21□□□□□ -0.61
C9orf3-204ENST00000424143 LITAFQ99732 161 aa11.21□□□□□ -0.61
C9orf3-204ENST00000424143 SPANXA1Q9NS26 97 aa11.21□□□□□ -0.61
C9orf3-204ENST00000424143 DCHS2Q6V1P9 2916 aa11.21□□□□□ -0.62
C9orf3-204ENST00000424143 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 C9JAW5 83 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 MRPL23Q16540 153 aaKnown RBP11.2□□□□□ -0.62
C9orf3-204ENST00000424143 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 ZFAND6Q6FIF0 208 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 SPTA1P02549 2419 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 TRAV2A0A0B4J234 112 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 MSMBP08118 114 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 IFITM1P13164 125 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
C9orf3-204ENST00000424143 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
C9orf3-204ENST00000424143 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
C9orf3-204ENST00000424143 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-204ENST00000424143 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
C9orf3-204ENST00000424143 YAE1D1Q9NRH1 226 aa11.19□□□□□ -0.62
C9orf3-204ENST00000424143 H3BT86 120 aa11.18□□□□□ -0.62
C9orf3-204ENST00000424143 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
C9orf3-204ENST00000424143 MUC6Q6W4X9 2439 aa11.18□□□□□ -0.62
C9orf3-204ENST00000424143 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 TEX29Q8N6K0 151 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 LRBAP50851 2863 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 C19orf84I3L1E1 186 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 ELANEP08246 267 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 DSCR9P59020 149 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 MIAQ16674 131 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
C9orf3-204ENST00000424143 B4DSR2 109 aa11.16□□□□□ -0.62
C9orf3-204ENST00000424143 COX6CP09669 75 aa11.16□□□□□ -0.62
C9orf3-204ENST00000424143 CD28P10747 220 aa11.16□□□□□ -0.62
C9orf3-204ENST00000424143 FAM240AA0A1B0GVK7 77 aa11.15□□□□□ -0.62
C9orf3-204ENST00000424143 EDN2P20800 178 aa11.15□□□□□ -0.62
C9orf3-204ENST00000424143 TIRAPP58753 221 aa11.15□□□□□ -0.62
C9orf3-204ENST00000424143 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
C9orf3-204ENST00000424143 PPDPFQ9H3Y8 114 aa11.15□□□□□ -0.62
C9orf3-204ENST00000424143 PRORYQ9H606 182 aa11.15□□□□□ -0.62
C9orf3-204ENST00000424143 TRAV12-2A0A075B6T6 113 aa11.14□□□□□ -0.63
C9orf3-204ENST00000424143 IGLV5-45A0A087WSX0 123 aa11.14□□□□□ -0.63
C9orf3-204ENST00000424143 CCL19Q99731 98 aa11.14□□□□□ -0.63
C9orf3-204ENST00000424143 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
C9orf3-204ENST00000424143 LAMA5O15230 3695 aa11.14□□□□□ -0.63
C9orf3-204ENST00000424143 SPTBN1Q01082 2364 aaKnown RBP11.14□□□□□ -0.63
C9orf3-204ENST00000424143 TRIAP1O43715 76 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 SVIPQ8NHG7 77 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 ICOSQ9Y6W8 199 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 HIVEP3Q5T1R4 2406 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 J3QLI3 93 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 Q1RN00 199 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
C9orf3-204ENST00000424143 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 UBE2E2Q96LR5 201 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 SPXQ9BT56 116 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
C9orf3-204ENST00000424143 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
C9orf3-204ENST00000424143 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
C9orf3-204ENST00000424143 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
C9orf3-204ENST00000424143 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
C9orf3-204ENST00000424143 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
C9orf3-204ENST00000424143 UBE2D4Q9Y2X8 147 aa11.12□□□□□ -0.63
C9orf3-204ENST00000424143 IGHV4-30-2A0A087WSY4 118 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 H3BMM0 161 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 SNCGO76070 127 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 ZNF415Q09FC8 603 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 CLUHP3Q96NS8 147 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 ANAPC13Q9BS18 74 aa11.11□□□□□ -0.63
C9orf3-204ENST00000424143 LST1O00453 97 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 ATP5J2P56134 94 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 GAGE5Q13069 117 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 GAGE6Q13070 117 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 COPS9Q8WXC6 57 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
C9orf3-204ENST00000424143 NDUFA1O15239 70 aa11.09□□□□□ -0.63
C9orf3-204ENST00000424143 IGHV3-53P01767 116 aa11.09□□□□□ -0.63
C9orf3-204ENST00000424143 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
C9orf3-204ENST00000424143 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
C9orf3-204ENST00000424143 H7C423 109 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms