RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 LYPD6BQ8NI32 183 aa14.68□□□□□ -0.06
TRAF4-204ENST00000422344 NUDT11Q96G61 164 aa14.68□□□□□ -0.06
TRAF4-204ENST00000422344 TM2D2Q9BX73 214 aa14.68□□□□□ -0.06
TRAF4-204ENST00000422344 DAZ3Q9NR90 486 aaKnown RBP14.68□□□□□ -0.06
TRAF4-204ENST00000422344 TRAV8-3A0A0A6YYJ7 113 aa14.67□□□□□ -0.06
TRAF4-204ENST00000422344 CEBPGP53567 150 aa14.67□□□□□ -0.06
TRAF4-204ENST00000422344 NIT1Q86X76 327 aa14.67□□□□□ -0.06
TRAF4-204ENST00000422344 OCC1Q8TAD7 63 aa14.67□□□□□ -0.06
TRAF4-204ENST00000422344 RPP21Q9H633 154 aaKnown RBP14.67□□□□□ -0.06
TRAF4-204ENST00000422344 KIF25-AS1Q9Y6Z4 181 aa14.67□□□□□ -0.06
TRAF4-204ENST00000422344 A0A087WX48 190 aa14.66□□□□□ -0.06
TRAF4-204ENST00000422344 FUSP35637 526 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRAF4-204ENST00000422344 LYZL1Q6UWQ5 148 aa14.66□□□□□ -0.06
TRAF4-204ENST00000422344 EIF5A2Q9GZV4 153 aaKnown RBP14.66□□□□□ -0.06
TRAF4-204ENST00000422344 H7C1H1 209 aa14.65□□□□□ -0.06
TRAF4-204ENST00000422344 TRGC1P0CF51 173 aa14.65□□□□□ -0.06
TRAF4-204ENST00000422344 RNASE7Q9H1E1 156 aaKnown RBP14.65□□□□□ -0.06
TRAF4-204ENST00000422344 K7EN84 100 aa14.64□□□□□ -0.07
TRAF4-204ENST00000422344 CHCHD7Q9BUK0 85 aa14.64□□□□□ -0.07
TRAF4-204ENST00000422344 TRBV6-8A0A0A6YYG3 113 aa14.63□□□□□ -0.07
TRAF4-204ENST00000422344 TMEM262E9PQX1 116 aa14.63□□□□□ -0.07
TRAF4-204ENST00000422344 ELOBQ15370 118 aa14.63□□□□□ -0.07
TRAF4-204ENST00000422344 RMI2Q96E14 147 aa14.63□□□□□ -0.07
TRAF4-204ENST00000422344 NTF3P20783 257 aa14.62□□□□□ -0.07
TRAF4-204ENST00000422344 CTRLP40313 264 aa14.62□□□□□ -0.07
TRAF4-204ENST00000422344 TMEM97Q5BJF2 176 aa14.62□□□□□ -0.07
TRAF4-204ENST00000422344 KLK12Q9UKR0 248 aa14.62□□□□□ -0.07
TRAF4-204ENST00000422344 LRCOL1A6NCL2 159 aa14.61□□□□□ -0.07
TRAF4-204ENST00000422344 SUMO4Q6EEV6 95 aa14.61□□□□□ -0.07
TRAF4-204ENST00000422344 WDR73Q6P4I2 378 aa14.61□□□□□ -0.07
TRAF4-204ENST00000422344 DNAJC30Q96LL9 226 aa14.61□□□□□ -0.07
TRAF4-204ENST00000422344 DPH3P1Q9H4G8 78 aa14.61□□□□□ -0.07
TRAF4-204ENST00000422344 COX11Q9Y6N1 276 aa14.61□□□□□ -0.07
TRAF4-204ENST00000422344 GATCO43716 136 aaKnown RBP14.6□□□□□ -0.07
TRAF4-204ENST00000422344 TWIST1Q15672 202 aa14.6□□□□□ -0.07
TRAF4-204ENST00000422344 FAM210AQ96ND0 272 aa14.6□□□□□ -0.07
TRAF4-204ENST00000422344 CHCHD5Q9BSY4 110 aa14.6□□□□□ -0.07
TRAF4-204ENST00000422344 DMBT1Q9UGM3 2413 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-204ENST00000422344 IGLV5-52A0A0A0MRZ9 124 aa14.59□□□□□ -0.07
TRAF4-204ENST00000422344 M0QY20 66 aa14.59□□□□□ -0.07
TRAF4-204ENST00000422344 PKIAP61925 76 aa14.59□□□□□ -0.07
TRAF4-204ENST00000422344 Q8N814 137 aa14.59□□□□□ -0.07
TRAF4-204ENST00000422344 NTN5Q8WTR8 489 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-204ENST00000422344 UBE2WQ96B02 151 aa14.59□□□□□ -0.07
TRAF4-204ENST00000422344 SMIM7Q9BQ49 75 aa14.59□□□□□ -0.07
TRAF4-204ENST00000422344 EPM2AB3EWF7 344 aa14.58□□□□□ -0.08
TRAF4-204ENST00000422344 NDUFS6O75380 124 aaKnown RBP14.57□□□□□ -0.08
TRAF4-204ENST00000422344 GCSHP23434 173 aa14.57□□□□□ -0.08
TRAF4-204ENST00000422344 RASL11AQ6T310 242 aa14.57□□□□□ -0.08
TRAF4-204ENST00000422344 FAM231DQ6ZW35 169 aa14.57□□□□□ -0.08
TRAF4-204ENST00000422344 TRBV25-1A0A075B6N4 114 aa14.56□□□□□ -0.08
TRAF4-204ENST00000422344 IGKV2D-24A0A075B6R9 120 aa14.56□□□□□ -0.08
TRAF4-204ENST00000422344 ZNF727A8MUV8 499 aa14.56□□□□□ -0.08
TRAF4-204ENST00000422344 A8MWL6 223 aa14.56□□□□□ -0.08
TRAF4-204ENST00000422344 SMIM15Q7Z3B0 74 aa14.56□□□□□ -0.08
TRAF4-204ENST00000422344 CNFNQ9BYD5 112 aa14.56□□□□□ -0.08
TRAF4-204ENST00000422344 CRPP02741 224 aa14.55□□□□□ -0.08
TRAF4-204ENST00000422344 Q0VG73 95 aa14.55□□□□□ -0.08
TRAF4-204ENST00000422344 SRP19P09132 144 aaKnown RBP14.54□□□□□ -0.08
TRAF4-204ENST00000422344 MPV17L2Q567V2 206 aa14.54□□□□□ -0.08
TRAF4-204ENST00000422344 NTM-AS1Q6ZSK4 140 aa14.54□□□□□ -0.08
TRAF4-204ENST00000422344 C15orf54Q8N8G6 183 aa14.54□□□□□ -0.08
TRAF4-204ENST00000422344 GTSF1Q8WW33 167 aa14.54□□□□□ -0.08
TRAF4-204ENST00000422344 IGHV1-24A0A0C4DH33 117 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 LECT2O14960 151 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 ANGP03950 147 aaKnown RBP14.53□□□□□ -0.08
TRAF4-204ENST00000422344 KRTAP10-1P60331 282 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 CT83Q5H943 113 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 LINC01551Q86U37 167 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 BORCS7Q96B45 105 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 NIT2Q9NQR4 276 aa14.53□□□□□ -0.08
TRAF4-204ENST00000422344 INAFM2P0DMQ5 153 aa14.52□□□□□ -0.09
TRAF4-204ENST00000422344 GAGE6Q13070 117 aa14.52□□□□□ -0.09
TRAF4-204ENST00000422344 PGLYRP4Q96LB8 373 aa14.52□□□□□ -0.09
TRAF4-204ENST00000422344 WFDC2Q14508 124 aa14.51□□□□□ -0.09
TRAF4-204ENST00000422344 IQCJQ1A5X6 159 aa14.51□□□□□ -0.09
TRAF4-204ENST00000422344 ATRAIDQ6UW56 229 aa14.51□□□□□ -0.09
TRAF4-204ENST00000422344 Q8N976 141 aa14.51□□□□□ -0.09
TRAF4-204ENST00000422344 BAALCQ8WXS3 180 aa14.51□□□□□ -0.09
TRAF4-204ENST00000422344 C1orf43Q9BWL3 253 aa14.51□□□□□ -0.09
TRAF4-204ENST00000422344 FAT1Q14517 4588 aa14.5□□□□□ -0.09
TRAF4-204ENST00000422344 TEX261Q6UWH6 196 aa14.5□□□□□ -0.09
TRAF4-204ENST00000422344 FRZBQ92765 325 aa14.49□□□□□ -0.09
TRAF4-204ENST00000422344 XGP55808 180 aa14.48□□□□□ -0.09
TRAF4-204ENST00000422344 RBX1P62877 108 aa14.48□□□□□ -0.09
TRAF4-204ENST00000422344 FAM74A3Q4VXF1 159 aa14.48□□□□□ -0.09
TRAF4-204ENST00000422344 TMEM243Q9BU79 118 aa14.48□□□□□ -0.09
TRAF4-204ENST00000422344 OSTCQ9NRP0 149 aa14.48□□□□□ -0.09
TRAF4-204ENST00000422344 VPS13BQ7Z7G8 4022 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 TRAV26-2A0A0B4J265 109 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 TMEM241Q24JQ0 296 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 ENHOQ6UWT2 76 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 GATD1Q8NB37 220 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 TSKUQ8WUA8 353 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 GFRA4Q9GZZ7 299 aa14.47□□□□□ -0.09
TRAF4-204ENST00000422344 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-204ENST00000422344 FOXA3P55318 350 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-204ENST00000422344 COTL1Q14019 142 aa14.46□□□□□ -0.09
TRAF4-204ENST00000422344 PEA15Q15121 130 aa14.46□□□□□ -0.09
TRAF4-204ENST00000422344 MIAQ16674 131 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms