RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 KRTAP10-2P60368 255 aa17.74■□□□□ 0.43
CDK9-202ENST00000421939 LINC01551Q86U37 167 aa17.74■□□□□ 0.43
CDK9-202ENST00000421939 Q9HAA7 133 aa17.74■□□□□ 0.43
CDK9-202ENST00000421939 DNAH5Q8TE73 4624 aa17.73■□□□□ 0.43
CDK9-202ENST00000421939 EREGO14944 169 aa17.73■□□□□ 0.43
CDK9-202ENST00000421939 GTSF1Q8WW33 167 aa17.73■□□□□ 0.43
CDK9-202ENST00000421939 SUMO4Q6EEV6 95 aa17.72■□□□□ 0.43
CDK9-202ENST00000421939 NIT1Q86X76 327 aa17.72■□□□□ 0.43
CDK9-202ENST00000421939 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.72■□□□□ 0.43
CDK9-202ENST00000421939 DPH3P1Q9H4G8 78 aa17.72■□□□□ 0.43
CDK9-202ENST00000421939 RYR1P21817 5038 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 A8MWL6 223 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 H7C1H1 209 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 M0QY20 66 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 TWIST1Q15672 202 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 CT83Q5H943 113 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 DAZ4Q86SG3 579 aaKnown RBP17.71■□□□□ 0.43
CDK9-202ENST00000421939 DAZ3Q9NR90 486 aaKnown RBP17.71■□□□□ 0.43
CDK9-202ENST00000421939 URGCP-MRPS24S4R325 110 aa17.71■□□□□ 0.43
CDK9-202ENST00000421939 A0A087WTM6 91 aa17.7■□□□□ 0.42
CDK9-202ENST00000421939 TRBV6-8A0A0A6YYG3 113 aa17.7■□□□□ 0.42
CDK9-202ENST00000421939 PSCAO43653 123 aa17.69■□□□□ 0.42
CDK9-202ENST00000421939 DNAJC30Q96LL9 226 aa17.68■□□□□ 0.42
CDK9-202ENST00000421939 CHCHD7Q9BUK0 85 aa17.68■□□□□ 0.42
CDK9-202ENST00000421939 A0A087WX48 190 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 TRAV8-3A0A0A6YYJ7 113 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 C9JQL5 133 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 PEA15Q15121 130 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 FAM74A3Q4VXF1 159 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 TMEM97Q5BJF2 176 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 KCNIP4Q6PIL6 250 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 RASL11AQ6T310 242 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 OSTCQ9NRP0 149 aa17.66■□□□□ 0.42
CDK9-202ENST00000421939 PGLYRP4Q96LB8 373 aa17.65■□□□□ 0.42
CDK9-202ENST00000421939 SRSF3P84103 164 aaKnown RBP17.64■□□□□ 0.41
CDK9-202ENST00000421939 TM2D2Q9BX73 214 aa17.64■□□□□ 0.41
CDK9-202ENST00000421939 PGPEP1Q9NXJ5 209 aa17.64■□□□□ 0.41
CDK9-202ENST00000421939 FOXA3P55318 350 aaPredicted RBP17.63■□□□□ 0.41
CDK9-202ENST00000421939 TMEM241Q24JQ0 296 aa17.63■□□□□ 0.41
CDK9-202ENST00000421939 NTM-AS1Q6ZSK4 140 aa17.63■□□□□ 0.41
CDK9-202ENST00000421939 SMIM15Q7Z3B0 74 aa17.63■□□□□ 0.41
CDK9-202ENST00000421939 TSKUQ8WUA8 353 aa17.63■□□□□ 0.41
CDK9-202ENST00000421939 SMDT1Q9H4I9 107 aa17.63■□□□□ 0.41
CDK9-202ENST00000421939 TMEM262E9PQX1 116 aa17.62■□□□□ 0.41
CDK9-202ENST00000421939 CDPF1Q6NVV7 123 aa17.62■□□□□ 0.41
CDK9-202ENST00000421939 C15orf54Q8N8G6 183 aa17.62■□□□□ 0.41
CDK9-202ENST00000421939 ISOC2Q96AB3 205 aa17.62■□□□□ 0.41
CDK9-202ENST00000421939 GFRA4Q9GZZ7 299 aa17.62■□□□□ 0.41
CDK9-202ENST00000421939 KLK12Q9UKR0 248 aa17.62■□□□□ 0.41
CDK9-202ENST00000421939 LRCOL1A6NCL2 159 aa17.61■□□□□ 0.41
CDK9-202ENST00000421939 ELOBQ15370 118 aa17.61■□□□□ 0.41
CDK9-202ENST00000421939 BORCS7Q96B45 105 aa17.61■□□□□ 0.41
CDK9-202ENST00000421939 CHCHD5Q9BSY4 110 aa17.61■□□□□ 0.41
CDK9-202ENST00000421939 NIT2Q9NQR4 276 aa17.61■□□□□ 0.41
CDK9-202ENST00000421939 APOBP04114 4563 aaKnown RBP17.6■□□□□ 0.41
CDK9-202ENST00000421939 HIGD1CA8MV81 97 aa17.6■□□□□ 0.41
CDK9-202ENST00000421939 FUSP35637 526 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDK9-202ENST00000421939 PKIAP61925 76 aa17.6■□□□□ 0.41
CDK9-202ENST00000421939 RPL23P62829 140 aaKnown RBP17.6■□□□□ 0.41
CDK9-202ENST00000421939 NAT8Q9UHE5 227 aa17.6■□□□□ 0.41
CDK9-202ENST00000421939 TRBV25-1A0A075B6N4 114 aa17.59■□□□□ 0.41
CDK9-202ENST00000421939 FAM231BA6NCW3 169 aa17.59■□□□□ 0.41
CDK9-202ENST00000421939 ADIRFQ15847 76 aa17.59■□□□□ 0.41
CDK9-202ENST00000421939 V9GYV3 84 aa17.59■□□□□ 0.41
CDK9-202ENST00000421939 CDK2AP2O75956 126 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 IQCJQ1A5X6 159 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 MPV17L2Q567V2 206 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 GATD1Q8NB37 220 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 FRZBQ92765 325 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 UBE2WQ96B02 151 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 HSPG2P98160 4391 aa17.58■□□□□ 0.4
CDK9-202ENST00000421939 TRAV26-2A0A0B4J265 109 aa17.57■□□□□ 0.4
CDK9-202ENST00000421939 IGHV1-24A0A0C4DH33 117 aa17.57■□□□□ 0.4
CDK9-202ENST00000421939 A0A1B0GUT8 65 aa17.57■□□□□ 0.4
CDK9-202ENST00000421939 RMI2Q96E14 147 aa17.57■□□□□ 0.4
CDK9-202ENST00000421939 COX11Q9Y6N1 276 aa17.56■□□□□ 0.4
CDK9-202ENST00000421939 GAGE6Q13070 117 aa17.54■□□□□ 0.4
CDK9-202ENST00000421939 IGKV2D-24A0A075B6R9 120 aa17.53■□□□□ 0.4
CDK9-202ENST00000421939 RAB14P61106 215 aa17.53■□□□□ 0.4
CDK9-202ENST00000421939 Q0VG73 95 aa17.53■□□□□ 0.4
CDK9-202ENST00000421939 ATRAIDQ6UW56 229 aa17.53■□□□□ 0.4
CDK9-202ENST00000421939 Q8N814 137 aa17.53■□□□□ 0.4
CDK9-202ENST00000421939 Q8N976 141 aa17.53■□□□□ 0.4
CDK9-202ENST00000421939 CRPP02741 224 aa17.52■□□□□ 0.4
CDK9-202ENST00000421939 ANGP03950 147 aaKnown RBP17.52■□□□□ 0.4
CDK9-202ENST00000421939 RPL39LQ96EH5 51 aaKnown RBP17.52■□□□□ 0.4
CDK9-202ENST00000421939 RBX1P62877 108 aa17.51■□□□□ 0.39
CDK9-202ENST00000421939 COTL1Q14019 142 aa17.51■□□□□ 0.39
CDK9-202ENST00000421939 WFDC2Q14508 124 aa17.51■□□□□ 0.39
CDK9-202ENST00000421939 NUP35Q8NFH5 326 aa17.51■□□□□ 0.39
CDK9-202ENST00000421939 NTN5Q8WTR8 489 aaPredicted RBP17.51■□□□□ 0.39
CDK9-202ENST00000421939 TMEM243Q9BU79 118 aa17.51■□□□□ 0.39
CDK9-202ENST00000421939 MAPKAPK5-AS1Q8N8E1 139 aa17.5■□□□□ 0.39
CDK9-202ENST00000421939 TMEM191AQ9H0A3 160 aa17.5■□□□□ 0.39
CDK9-202ENST00000421939 RIGQ13278 110 aa17.49■□□□□ 0.39
CDK9-202ENST00000421939 ENHOQ6UWT2 76 aa17.49■□□□□ 0.39
CDK9-202ENST00000421939 NAT8BQ9UHF3 227 aa17.49■□□□□ 0.39
CDK9-202ENST00000421939 IGLV5-52A0A0A0MRZ9 124 aa17.48■□□□□ 0.39
CDK9-202ENST00000421939 LECT2O14960 151 aa17.48■□□□□ 0.39
CDK9-202ENST00000421939 DEFB104AQ8WTQ1 72 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms