RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 NHLRC4P0CG21 123 aaPredicted RBP15.81■□□□□ 0.12
USP48-205ENST00000421625 ZNF22P17026 224 aaPredicted RBP15.81■□□□□ 0.12
USP48-205ENST00000421625 A0A0B4J2C4 111 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 TRBV7-9A0A0J9YWB2 115 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 IGHV4-39P01824 125 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 BEX4Q9NWD9 120 aaPredicted RBP15.81■□□□□ 0.12
USP48-205ENST00000421625 LMO4P61968 165 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 ZNF56Q15929 161 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 Q8N1Y9 231 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 BPESC1Q9GZL8 116 aa15.81■□□□□ 0.12
USP48-205ENST00000421625 TRAV4A0A0B4J268 109 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 TRBV6-5A0A0K0K1A5 114 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 P0DMU3 169 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 FAM231AP0DMU4 169 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 FAM231CP0DMU5 169 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 PRORYQ9H606 182 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 A0A0J9YXV3 536 aa15.8■□□□□ 0.12
USP48-205ENST00000421625 M0QXV9 152 aa15.79■□□□□ 0.12
USP48-205ENST00000421625 RHODO00212 210 aa15.79■□□□□ 0.12
USP48-205ENST00000421625 MDFICQ9P1T7 246 aa15.79■□□□□ 0.12
USP48-205ENST00000421625 LINC01620Q4KN68 170 aa15.79■□□□□ 0.12
USP48-205ENST00000421625 BRD3OSQ6XYD6 125 aa15.79■□□□□ 0.12
USP48-205ENST00000421625 ADARB2-AS1A8MUL3 147 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 M0QY20 66 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 IGHV1-69P01742 117 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 HERV-K104P63124 156 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 UBTD1Q9HAC8 227 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 SPG11Q96JI7 2443 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 TEX49A0A1B0GTD5 131 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 VPS13CQ709C8 3753 aa15.78■□□□□ 0.12
USP48-205ENST00000421625 NSUN5P1Q3KNT7 163 aa15.77■□□□□ 0.12
USP48-205ENST00000421625 GAGE5Q13069 117 aa15.77■□□□□ 0.11
USP48-205ENST00000421625 GAGE6Q13070 117 aa15.77■□□□□ 0.11
USP48-205ENST00000421625 ATXN8Q156A1 80 aa15.77■□□□□ 0.11
USP48-205ENST00000421625 MYO18BQ8IUG5 2567 aa15.77■□□□□ 0.11
USP48-205ENST00000421625 TRAV12-2A0A075B6T6 113 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 SNCGO76070 127 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 PF4V1P10720 104 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 LY6EQ16553 131 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 M0R2P5 195 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 GAGE2BQ13066 116 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 GAGE2EQ4V326 116 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 GAGE2DQ9UEU5 116 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 IGHV3-16A0A0C4DH30 117 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 A0A0J9YXY3 114 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 IGKV3-20P01619 116 aa15.76■□□□□ 0.11
USP48-205ENST00000421625 UTP20O75691 2785 aaKnown RBP15.75■□□□□ 0.11
USP48-205ENST00000421625 TRIAP1O43715 76 aa15.75■□□□□ 0.11
USP48-205ENST00000421625 GNLYP22749 145 aa15.75■□□□□ 0.11
USP48-205ENST00000421625 RHOHQ15669 191 aa15.75■□□□□ 0.11
USP48-205ENST00000421625 C20orf203Q8NBC4 194 aa15.75■□□□□ 0.11
USP48-205ENST00000421625 C9orf85Q96MD7 179 aa15.75■□□□□ 0.11
USP48-205ENST00000421625 CRYBG3Q68DQ2 2970 aa15.74■□□□□ 0.11
USP48-205ENST00000421625 IGLV4-3A0A075B6K6 122 aa15.74■□□□□ 0.11
USP48-205ENST00000421625 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.74■□□□□ 0.11
USP48-205ENST00000421625 NDUFV3P56181 108 aaKnown RBP15.74■□□□□ 0.11
USP48-205ENST00000421625 DAZ1Q9NQZ3 744 aaKnown RBP15.73■□□□□ 0.11
USP48-205ENST00000421625 USMG5Q96IX5 58 aa15.73■□□□□ 0.11
USP48-205ENST00000421625 SPXQ9BT56 116 aa15.73■□□□□ 0.11
USP48-205ENST00000421625 USP9XQ93008 2570 aaPredicted RBP15.73■□□□□ 0.11
USP48-205ENST00000421625 ABCA2Q9BZC7 2435 aa15.73■□□□□ 0.11
USP48-205ENST00000421625 DCANP1Q8TF63 244 aa15.72■□□□□ 0.11
USP48-205ENST00000421625 ODF3Q96PU9 254 aa15.72■□□□□ 0.11
USP48-205ENST00000421625 IGHV3-30-3P0DP02 117 aa15.72■□□□□ 0.11
USP48-205ENST00000421625 SMIM20Q8N5G0 67 aa15.72■□□□□ 0.11
USP48-205ENST00000421625 LITAFQ99732 161 aa15.71■□□□□ 0.11
USP48-205ENST00000421625 TRAV8-4A0A0B4J246 113 aa15.71■□□□□ 0.1
USP48-205ENST00000421625 A0A0J9YX75 114 aa15.71■□□□□ 0.1
USP48-205ENST00000421625 TRBV10-2A0A0K0K1G8 114 aa15.71■□□□□ 0.1
USP48-205ENST00000421625 TRAV8-3A0A0A6YYJ7 113 aa15.7■□□□□ 0.1
USP48-205ENST00000421625 TRBV30A0A0K0K1B3 111 aa15.7■□□□□ 0.1
USP48-205ENST00000421625 PRSS2P07478 247 aa15.7■□□□□ 0.1
USP48-205ENST00000421625 ID1P41134 155 aa15.7■□□□□ 0.1
USP48-205ENST00000421625 BLCAPP62952 87 aa15.7■□□□□ 0.1
USP48-205ENST00000421625 Q6ZSV7 163 aa15.7■□□□□ 0.1
USP48-205ENST00000421625 CCDC179H3BU77 68 aa15.69■□□□□ 0.1
USP48-205ENST00000421625 C19orf84I3L1E1 186 aa15.69■□□□□ 0.1
USP48-205ENST00000421625 RPL13AP40429 203 aaKnown RBP15.69■□□□□ 0.1
USP48-205ENST00000421625 USP24Q9UPU5 2620 aa15.69■□□□□ 0.1
USP48-205ENST00000421625 I3L3M4 83 aa15.69■□□□□ 0.1
USP48-205ENST00000421625 ADAMTSL4-AS1Q5T5F5 129 aa15.69■□□□□ 0.1
USP48-205ENST00000421625 PRRC2AP48634 2157 aaKnown RBP15.69■□□□□ 0.1
USP48-205ENST00000421625 H3BMM0 161 aa15.68■□□□□ 0.1
USP48-205ENST00000421625 UBE2WQ96B02 151 aa15.68■□□□□ 0.1
USP48-205ENST00000421625 NPC2P61916 151 aa15.68■□□□□ 0.1
USP48-205ENST00000421625 RNASE13Q5GAN3 156 aaKnown RBP15.68■□□□□ 0.1
USP48-205ENST00000421625 CEMP1Q6PRD7 247 aaPredicted RBP15.68■□□□□ 0.1
USP48-205ENST00000421625 C15orf53Q8NAA6 179 aa15.68■□□□□ 0.1
USP48-205ENST00000421625 TIMM21Q9BVV7 248 aa15.68■□□□□ 0.1
USP48-205ENST00000421625 CENPEQ02224 2701 aa15.68■□□□□ 0.1
USP48-205ENST00000421625 IGHG2P01859 326 aa15.67■□□□□ 0.1
USP48-205ENST00000421625 TTC32Q5I0X7 151 aa15.67■□□□□ 0.1
USP48-205ENST00000421625 FAM104AQ969W3 186 aa15.67■□□□□ 0.1
USP48-205ENST00000421625 IFITM1P13164 125 aa15.67■□□□□ 0.1
USP48-205ENST00000421625 C2orf82Q6UX34 121 aa15.67■□□□□ 0.1
USP48-205ENST00000421625 ICOSQ9Y6W8 199 aa15.67■□□□□ 0.1
USP48-205ENST00000421625 EPG5Q9HCE0 2579 aa15.66■□□□□ 0.1
USP48-205ENST00000421625 SPINK13Q1W4C9 94 aa15.66■□□□□ 0.1
USP48-205ENST00000421625 LINC01600Q96MT4 127 aa15.66■□□□□ 0.1
USP48-205ENST00000421625 A8MZ25 164 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms