RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
MSL3-208ENST00000421368 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
MSL3-208ENST00000421368 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
MSL3-208ENST00000421368 SUMO4Q6EEV6 95 aa12.07□□□□□ -0.48
MSL3-208ENST00000421368 TSKUQ8WUA8 353 aa12.07□□□□□ -0.48
MSL3-208ENST00000421368 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
MSL3-208ENST00000421368 V9GYV3 84 aa12.07□□□□□ -0.48
MSL3-208ENST00000421368 A0A087WWC5 75 aa12.06□□□□□ -0.48
MSL3-208ENST00000421368 K7EP13 123 aa12.06□□□□□ -0.48
MSL3-208ENST00000421368 M0QY20 66 aa12.06□□□□□ -0.48
MSL3-208ENST00000421368 Q6ZRN7 208 aaPredicted RBP12.06□□□□□ -0.48
MSL3-208ENST00000421368 C15orf54Q8N8G6 183 aa12.06□□□□□ -0.48
MSL3-208ENST00000421368 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
MSL3-208ENST00000421368 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
MSL3-208ENST00000421368 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 HIGD1CA8MV81 97 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 Q8N3U1 123 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
MSL3-208ENST00000421368 H7C1H1 209 aa12.03□□□□□ -0.48
MSL3-208ENST00000421368 RASL11AQ6T310 242 aa12.02□□□□□ -0.49
MSL3-208ENST00000421368 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
MSL3-208ENST00000421368 BORCS7Q96B45 105 aa12.01□□□□□ -0.49
MSL3-208ENST00000421368 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
MSL3-208ENST00000421368 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
MSL3-208ENST00000421368 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
MSL3-208ENST00000421368 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
MSL3-208ENST00000421368 DAZ4Q86SG3 579 aaKnown RBP12□□□□□ -0.49
MSL3-208ENST00000421368 NFE4Q86UQ8 179 aa12□□□□□ -0.49
MSL3-208ENST00000421368 NIT1Q86X76 327 aa12□□□□□ -0.49
MSL3-208ENST00000421368 GATD1Q8NB37 220 aa12□□□□□ -0.49
MSL3-208ENST00000421368 NUP35Q8NFH5 326 aa12□□□□□ -0.49
MSL3-208ENST00000421368 DAZ3Q9NR90 486 aaKnown RBP12□□□□□ -0.49
MSL3-208ENST00000421368 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
MSL3-208ENST00000421368 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
MSL3-208ENST00000421368 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
MSL3-208ENST00000421368 SMIM27A0A1W2PRY6 76 aa11.98□□□□□ -0.49
MSL3-208ENST00000421368 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.98□□□□□ -0.49
MSL3-208ENST00000421368 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
MSL3-208ENST00000421368 DNAH5Q8TE73 4624 aa11.98□□□□□ -0.49
MSL3-208ENST00000421368 RIGQ13278 110 aa11.96□□□□□ -0.49
MSL3-208ENST00000421368 LAGE3Q14657 143 aa11.96□□□□□ -0.49
MSL3-208ENST00000421368 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
MSL3-208ENST00000421368 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.49
MSL3-208ENST00000421368 TMEM191AQ9H0A3 160 aa11.96□□□□□ -0.49
MSL3-208ENST00000421368 Q9HAA7 133 aa11.96□□□□□ -0.49
MSL3-208ENST00000421368 URGCP-MRPS24S4R325 110 aa11.96□□□□□ -0.49
MSL3-208ENST00000421368 FRZBQ92765 325 aa11.95□□□□□ -0.5
MSL3-208ENST00000421368 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
MSL3-208ENST00000421368 A0A087WX48 190 aa11.94□□□□□ -0.5
MSL3-208ENST00000421368 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
MSL3-208ENST00000421368 GAS8-AS1O95177 125 aa11.93□□□□□ -0.5
MSL3-208ENST00000421368 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
MSL3-208ENST00000421368 IQCJQ1A5X6 159 aa11.93□□□□□ -0.5
MSL3-208ENST00000421368 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
MSL3-208ENST00000421368 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
MSL3-208ENST00000421368 KLK12Q9UKR0 248 aa11.93□□□□□ -0.5
MSL3-208ENST00000421368 LRP1BQ9NZR2 4599 aa11.93□□□□□ -0.5
MSL3-208ENST00000421368 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 RAB4AP20338 218 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 MPV17L2Q567V2 206 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 KCNIP4Q6PIL6 250 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 SPATA12Q7Z6I5 190 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 AMN1Q8IY45 258 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
MSL3-208ENST00000421368 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
MSL3-208ENST00000421368 ADCYAP1P18509 176 aa11.91□□□□□ -0.5
MSL3-208ENST00000421368 A0A087WTM6 91 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 TMEM218A2RU14 115 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 PPP1R2P9O14990 202 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 KRTAP10-2P60368 255 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 GAGE6Q13070 117 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.5
MSL3-208ENST00000421368 KIAA1109Q2LD37 5005 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 PSCAO43653 123 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 CAMPP49913 170 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 PKIAP61925 76 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 COTL1Q14019 142 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 ELOBQ15370 118 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 MRPL54Q6P161 138 aaKnown RBP11.89□□□□□ -0.51
MSL3-208ENST00000421368 COMMD7Q86VX2 200 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 Q8N976 141 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 MRAP2Q96G30 205 aa11.89□□□□□ -0.51
MSL3-208ENST00000421368 A0A1B0GW15 77 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 A0A1B0GXF2 115 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 SDHAF1A6NFY7 115 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 RPS10P46783 165 aaKnown RBP11.88□□□□□ -0.51
MSL3-208ENST00000421368 UBE2WQ96B02 151 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 ANAPC16Q96DE5 110 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 TMEM243Q9BU79 118 aa11.88□□□□□ -0.51
MSL3-208ENST00000421368 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
MSL3-208ENST00000421368 F8W036 122 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms