RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 GAGE12JA6NER3 117 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 A8MWL6 223 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 DNAH10OSP0CZ25 163 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 BTF3P20290 206 aaKnown RBP7.16□□□□□ -1.26
RFC1-203ENST00000418436 NTF3P20783 257 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 FOXA3P55318 350 aaPredicted RBP7.16□□□□□ -1.26
RFC1-203ENST00000418436 RAB14P61106 215 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 SSTP61278 116 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 IFITM2Q01629 132 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 GAGE1Q13065 139 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 GAGE4Q13068 117 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 GAGE5Q13069 117 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 GAGE13Q4V321 117 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 C1orf134Q5TEV5 83 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 WFDC10BQ8IUB3 73 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 OR10G8Q8NGN5 311 aa7.16□□□□□ -1.26
RFC1-203ENST00000418436 SMIM17P0DL12 118 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 RPL23P62829 140 aaKnown RBP7.15□□□□□ -1.26
RFC1-203ENST00000418436 ZNF56Q15929 161 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 SOHLH1Q5JUK2 328 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 LELP1Q5T871 98 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 C6orf223Q8N319 242 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 ISOC2Q96AB3 205 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 NAT8Q9UHE5 227 aa7.15□□□□□ -1.26
RFC1-203ENST00000418436 TRBV7-3A0A075B6L6 115 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 FAM231BA6NCW3 169 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 K7EP13 123 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 EVI2AP22794 236 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 UBE2D3P61077 147 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 UBE2D2P62837 147 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 RPL36AP83881 106 aaKnown RBP7.14□□□□□ -1.27
RFC1-203ENST00000418436 NEXN-AS1Q8NBZ9 246 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
RFC1-203ENST00000418436 KRTAP4-2Q9BYR5 136 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 GFRA4Q9GZZ7 299 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 V9GYV3 84 aa7.14□□□□□ -1.27
RFC1-203ENST00000418436 A0A087WWC5 75 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 TRAV8-6A0A0B4J262 113 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 A0A1B0GVY2 172 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 PRSS29PA6NIE9 313 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 F5H697 171 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 M0QY20 66 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 TWIST1Q15672 202 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 DPH3P1Q9H4G8 78 aa7.13□□□□□ -1.27
RFC1-203ENST00000418436 PKD1P98161 4303 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 TRAV9-2A0A087WT02 112 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 ADIRFQ15847 76 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 LINC01556Q5JQF7 62 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 OR10J3Q5JRS4 329 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 C15orf54Q8N8G6 183 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 HECTD4Q9Y4D8 3996 aa7.12□□□□□ -1.27
RFC1-203ENST00000418436 HIGD1CA8MV81 97 aa7.11□□□□□ -1.27
RFC1-203ENST00000418436 MGPP08493 103 aa7.11□□□□□ -1.27
RFC1-203ENST00000418436 DNAJC30Q96LL9 226 aa7.11□□□□□ -1.27
RFC1-203ENST00000418436 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
RFC1-203ENST00000418436 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
RFC1-203ENST00000418436 H7C1H1 209 aa7.1□□□□□ -1.27
RFC1-203ENST00000418436 Q6ZRN7 208 aaPredicted RBP7.1□□□□□ -1.27
RFC1-203ENST00000418436 C10orf126Q8N4M7 172 aa7.1□□□□□ -1.27
RFC1-203ENST00000418436 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
RFC1-203ENST00000418436 SMIM27A0A1W2PRY6 76 aa7.09□□□□□ -1.27
RFC1-203ENST00000418436 RASL11AQ6T310 242 aa7.09□□□□□ -1.27
RFC1-203ENST00000418436 DAZ4Q86SG3 579 aaKnown RBP7.09□□□□□ -1.27
RFC1-203ENST00000418436 NUP35Q8NFH5 326 aa7.09□□□□□ -1.27
RFC1-203ENST00000418436 BORCS7Q96B45 105 aa7.09□□□□□ -1.27
RFC1-203ENST00000418436 DAZ3Q9NR90 486 aaKnown RBP7.09□□□□□ -1.27
RFC1-203ENST00000418436 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
RFC1-203ENST00000418436 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 IBA57-AS1B1ANH7 110 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 UQCC3Q6UW78 93 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 SMIM15Q7Z3B0 74 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 NFE4Q86UQ8 179 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 NIT1Q86X76 327 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 GATD1Q8NB37 220 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 FRZBQ92765 325 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 TMEM191AQ9H0A3 160 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 NIT2Q9NQR4 276 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 NAT8BQ9UHF3 227 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
RFC1-203ENST00000418436 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
RFC1-203ENST00000418436 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
RFC1-203ENST00000418436 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
RFC1-203ENST00000418436 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
RFC1-203ENST00000418436 PNRC1Q12796 327 aaPredicted RBP7.07□□□□□ -1.28
RFC1-203ENST00000418436 TMEM97Q5BJF2 176 aa7.07□□□□□ -1.28
RFC1-203ENST00000418436 NTM-AS1Q6ZSK4 140 aa7.07□□□□□ -1.28
RFC1-203ENST00000418436 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.07□□□□□ -1.28
RFC1-203ENST00000418436 RIGQ13278 110 aa7.06□□□□□ -1.28
RFC1-203ENST00000418436 LAGE3Q14657 143 aa7.06□□□□□ -1.28
RFC1-203ENST00000418436 CHCHD7Q9BUK0 85 aa7.06□□□□□ -1.28
RFC1-203ENST00000418436 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
RFC1-203ENST00000418436 PPP1R2P9O14990 202 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms