RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 I3L3M4 83 aa13.29□□□□□ -0.28
SCARB1-203ENST00000415380 ZNF22P17026 224 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-203ENST00000415380 FHL3Q13643 280 aa13.29□□□□□ -0.28
SCARB1-203ENST00000415380 ITPR1Q14643 2758 aa13.29□□□□□ -0.28
SCARB1-203ENST00000415380 A4D1N5 150 aa13.28□□□□□ -0.28
SCARB1-203ENST00000415380 TEN1Q86WV5 123 aa13.28□□□□□ -0.28
SCARB1-203ENST00000415380 RHODO00212 210 aa13.28□□□□□ -0.28
SCARB1-203ENST00000415380 EIF4EBP3O60516 100 aaPredicted RBP13.28□□□□□ -0.28
SCARB1-203ENST00000415380 IGHV4-59P01825 116 aa13.28□□□□□ -0.28
SCARB1-203ENST00000415380 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
SCARB1-203ENST00000415380 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
SCARB1-203ENST00000415380 A0A0J9YXV3 536 aa13.27□□□□□ -0.28
SCARB1-203ENST00000415380 PPDPFLQ8WWR9 84 aa13.27□□□□□ -0.28
SCARB1-203ENST00000415380 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.29
SCARB1-203ENST00000415380 RAX2Q96IS3 184 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 A8MWV9 139 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 SYNJ2BPP57105 145 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 NCOR2Q9Y618 2525 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 A0A1B0GV72 72 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 VCX2Q9H322 139 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 PRORYQ9H606 182 aa13.26□□□□□ -0.29
SCARB1-203ENST00000415380 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
SCARB1-203ENST00000415380 B4DSR2 109 aa13.25□□□□□ -0.29
SCARB1-203ENST00000415380 DEFB112Q30KQ8 113 aa13.25□□□□□ -0.29
SCARB1-203ENST00000415380 MUSTN1Q8IVN3 82 aa13.25□□□□□ -0.29
SCARB1-203ENST00000415380 TMEM263Q8WUH6 116 aaKnown RBP13.25□□□□□ -0.29
SCARB1-203ENST00000415380 IGHV3-33P01772 117 aa13.25□□□□□ -0.29
SCARB1-203ENST00000415380 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
SCARB1-203ENST00000415380 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
SCARB1-203ENST00000415380 TCTEX1D4Q5JR98 221 aa13.24□□□□□ -0.29
SCARB1-203ENST00000415380 SPTBN4Q9H254 2564 aa13.24□□□□□ -0.29
SCARB1-203ENST00000415380 ANKRD29Q8N6D5 301 aa13.23□□□□□ -0.29
SCARB1-203ENST00000415380 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
SCARB1-203ENST00000415380 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
SCARB1-203ENST00000415380 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
SCARB1-203ENST00000415380 IGHV3-73A0A0B4J1V6 119 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 A0A0B4J2C4 111 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 CRYBA4P53673 196 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 H7C2G1 150 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 MT-ATP8P03928 68 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 ERG28Q9UKR5 140 aa13.22□□□□□ -0.29
SCARB1-203ENST00000415380 CELSR2Q9HCU4 2923 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 M0R2P5 195 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 SPINK8P0C7L1 97 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 CKS1BP61024 79 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 RNF152Q8N8N0 203 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 FAM104AQ969W3 186 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 A0A0J9YXY3 114 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 XGP55808 180 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 PROK1P58294 105 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 Q6ZUT4 128 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 SPXQ9BT56 116 aa13.21□□□□□ -0.29
SCARB1-203ENST00000415380 CRYBG3Q68DQ2 2970 aa13.2□□□□□ -0.3
SCARB1-203ENST00000415380 HTN1P15515 57 aa13.2□□□□□ -0.3
SCARB1-203ENST00000415380 CD28P10747 220 aa13.2□□□□□ -0.3
SCARB1-203ENST00000415380 SLC25A20O43772 301 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 IGHV3-30-3P0DP02 117 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 PYGO1Q9Y3Y4 419 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■■□□ 14.7
SCARB1-203ENST00000415380 ADARB2-AS1A8MUL3 147 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 C9JAW5 83 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
SCARB1-203ENST00000415380 CEMP1Q6PRD7 247 aaPredicted RBP13.19□□□□□ -0.3
SCARB1-203ENST00000415380 KNCNA6PVL3 124 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 GATA3P23771 443 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 TIMM21Q9BVV7 248 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
SCARB1-203ENST00000415380 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.18□□□□□ -0.3
SCARB1-203ENST00000415380 MRPS36P82909 103 aaKnown RBP13.18□□□□□ -0.3
SCARB1-203ENST00000415380 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
SCARB1-203ENST00000415380 LITAFQ99732 161 aa13.17□□□□□ -0.3
SCARB1-203ENST00000415380 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
SCARB1-203ENST00000415380 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
SCARB1-203ENST00000415380 ELANEP08246 267 aa13.17□□□□□ -0.3
SCARB1-203ENST00000415380 SPG11Q96JI7 2443 aa13.17□□□□□ -0.3
SCARB1-203ENST00000415380 PRM2P04554 102 aa13.16□□□□□ -0.3
SCARB1-203ENST00000415380 Q1RN00 199 aa13.16□□□□□ -0.3
SCARB1-203ENST00000415380 NRGNQ92686 78 aa13.16□□□□□ -0.3
SCARB1-203ENST00000415380 CSPG4Q6UVK1 2322 aa13.16□□□□□ -0.3
SCARB1-203ENST00000415380 Q9UF83 564 aa13.16□□□□□ -0.3
SCARB1-203ENST00000415380 M0QXV9 152 aa13.15□□□□□ -0.3
SCARB1-203ENST00000415380 TNFRSF18Q9Y5U5 241 aa13.15□□□□□ -0.3
SCARB1-203ENST00000415380 SORL1Q92673 2214 aa13.14□□□□□ -0.31
SCARB1-203ENST00000415380 DEFB131AP59861 70 aa13.14□□□□□ -0.31
SCARB1-203ENST00000415380 Q6ZSN1 163 aa13.14□□□□□ -0.31
SCARB1-203ENST00000415380 LINC01356Q8N9X3 169 aa13.14□□□□□ -0.31
SCARB1-203ENST00000415380 IGHV1-58A0A0C4DH39 117 aa13.13□□□□□ -0.31
SCARB1-203ENST00000415380 UBE2E2Q96LR5 201 aa13.13□□□□□ -0.31
SCARB1-203ENST00000415380 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
SCARB1-203ENST00000415380 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
SCARB1-203ENST00000415380 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
SCARB1-203ENST00000415380 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
SCARB1-203ENST00000415380 GEMIN7Q9H840 131 aaKnown RBP13.13□□□□□ -0.31
SCARB1-203ENST00000415380 ATXN8Q156A1 80 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 ADAMTSL4-AS1Q5T5F5 129 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 CHCHD7Q9BUK0 85 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 PRSS2P07478 247 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 ZNF702PQ9H963 129 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms