RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
UBXN4-202ENST00000415164 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
UBXN4-202ENST00000415164 DPH3Q96FX2 82 aa12.44□□□□□ -0.42
UBXN4-202ENST00000415164 DERL1Q9BUN8 251 aa12.44□□□□□ -0.42
UBXN4-202ENST00000415164 IGLV10-54A0A075B6I4 117 aa12.43□□□□□ -0.42
UBXN4-202ENST00000415164 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
UBXN4-202ENST00000415164 SMIM17P0DL12 118 aa12.43□□□□□ -0.42
UBXN4-202ENST00000415164 RBX1P62877 108 aa12.43□□□□□ -0.42
UBXN4-202ENST00000415164 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
UBXN4-202ENST00000415164 C9orf163Q8N9P6 203 aa12.43□□□□□ -0.42
UBXN4-202ENST00000415164 PANO1I0J062 215 aa12.42□□□□□ -0.42
UBXN4-202ENST00000415164 PAGE4O60829 102 aa12.42□□□□□ -0.42
UBXN4-202ENST00000415164 NTM-AS1Q6ZSK4 140 aa12.42□□□□□ -0.42
UBXN4-202ENST00000415164 TCEAL7Q9BRU2 100 aa12.42□□□□□ -0.42
UBXN4-202ENST00000415164 TRBV25-1A0A075B6N4 114 aa12.41□□□□□ -0.42
UBXN4-202ENST00000415164 FHITP49789 147 aa12.41□□□□□ -0.42
UBXN4-202ENST00000415164 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
UBXN4-202ENST00000415164 MGPP08493 103 aa12.4□□□□□ -0.42
UBXN4-202ENST00000415164 BAGE2Q86Y30 109 aa12.4□□□□□ -0.42
UBXN4-202ENST00000415164 A0A0D9SG52 128 aa12.39□□□□□ -0.43
UBXN4-202ENST00000415164 SCO2A0A1W2PP80 73 aa12.39□□□□□ -0.43
UBXN4-202ENST00000415164 hDV102S1A0JD36 115 aa12.39□□□□□ -0.43
UBXN4-202ENST00000415164 ARPC5O15511 151 aa12.39□□□□□ -0.43
UBXN4-202ENST00000415164 PFDN1O60925 122 aa12.39□□□□□ -0.43
UBXN4-202ENST00000415164 TPPP3Q9BW30 176 aa12.39□□□□□ -0.43
UBXN4-202ENST00000415164 SNAI2O43623 268 aa12.38□□□□□ -0.43
UBXN4-202ENST00000415164 RAB5CP51148 216 aa12.38□□□□□ -0.43
UBXN4-202ENST00000415164 REG3AQ06141 175 aa12.38□□□□□ -0.43
UBXN4-202ENST00000415164 SDIM1Q6ZPB5 146 aa12.38□□□□□ -0.43
UBXN4-202ENST00000415164 AP1S3Q96PC3 154 aa12.38□□□□□ -0.43
UBXN4-202ENST00000415164 PRR34Q9NV39 138 aa12.38□□□□□ -0.43
UBXN4-202ENST00000415164 IGHV1-24A0A0C4DH33 117 aa12.37□□□□□ -0.43
UBXN4-202ENST00000415164 S100A9P06702 114 aaKnown RBP12.37□□□□□ -0.43
UBXN4-202ENST00000415164 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
UBXN4-202ENST00000415164 FAM213BQ8TBF2 198 aa12.37□□□□□ -0.43
UBXN4-202ENST00000415164 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
UBXN4-202ENST00000415164 CXCL1P09341 107 aa12.36□□□□□ -0.43
UBXN4-202ENST00000415164 KRTAP26-1Q6PEX3 210 aa12.36□□□□□ -0.43
UBXN4-202ENST00000415164 CYTL1Q9NRR1 136 aa12.36□□□□□ -0.43
UBXN4-202ENST00000415164 AP5S1Q9NUS5 200 aa12.36□□□□□ -0.43
UBXN4-202ENST00000415164 VAX2Q9UIW0 290 aa12.36□□□□□ -0.43
UBXN4-202ENST00000415164 OR5AL1P0C617 328 aa12.35□□□□□ -0.43
UBXN4-202ENST00000415164 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
UBXN4-202ENST00000415164 CHTF8P0CG12 524 aa12.34□□□□□ -0.43
UBXN4-202ENST00000415164 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
UBXN4-202ENST00000415164 MT1HL1P0DM35 61 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 GZMBP10144 247 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 IQCJQ1A5X6 159 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 Q6ZRU5 148 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 MLST8Q9BVC4 326 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
UBXN4-202ENST00000415164 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.32□□□□□ -0.44
UBXN4-202ENST00000415164 NKX2-5P52952 324 aaPredicted RBP12.32□□□□□ -0.44
UBXN4-202ENST00000415164 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
UBXN4-202ENST00000415164 A0A087WYN8 130 aa12.31□□□□□ -0.44
UBXN4-202ENST00000415164 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
UBXN4-202ENST00000415164 H7C1H1 209 aa12.31□□□□□ -0.44
UBXN4-202ENST00000415164 CNBPP62633 177 aaKnown RBP12.31□□□□□ -0.44
UBXN4-202ENST00000415164 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
UBXN4-202ENST00000415164 KCNRGQ8N5I3 272 aa12.31□□□□□ -0.44
UBXN4-202ENST00000415164 TMEM243Q9BU79 118 aa12.31□□□□□ -0.44
UBXN4-202ENST00000415164 IGLV4-60A0A075B6I1 120 aa12.3□□□□□ -0.44
UBXN4-202ENST00000415164 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
UBXN4-202ENST00000415164 UBE2L6O14933 153 aa12.3□□□□□ -0.44
UBXN4-202ENST00000415164 TMUB2Q71RG4 321 aa12.3□□□□□ -0.44
UBXN4-202ENST00000415164 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 G3V3Q6 166 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 M0QY20 66 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 P01737 135 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 SULT1A2P50226 295 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 FER1L6-AS1Q8NA97 138 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 GFRA4Q9GZZ7 299 aa12.29□□□□□ -0.44
UBXN4-202ENST00000415164 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
UBXN4-202ENST00000415164 OR2D3Q8NGH3 330 aa12.28□□□□□ -0.44
UBXN4-202ENST00000415164 MBD3L1Q8WWY6 194 aa12.28□□□□□ -0.44
UBXN4-202ENST00000415164 PHOX2AO14813 284 aa12.27□□□□□ -0.45
UBXN4-202ENST00000415164 SLPIP03973 132 aa12.27□□□□□ -0.45
UBXN4-202ENST00000415164 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.45
UBXN4-202ENST00000415164 CIRBPQ14011 172 aaKnown RBP12.27□□□□□ -0.45
UBXN4-202ENST00000415164 C7orf33Q8WU49 177 aa12.27□□□□□ -0.45
UBXN4-202ENST00000415164 UMAD1C9J7I0 102 aa12.26□□□□□ -0.45
UBXN4-202ENST00000415164 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
UBXN4-202ENST00000415164 SPACA4Q8TDM5 124 aa12.26□□□□□ -0.45
UBXN4-202ENST00000415164 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
UBXN4-202ENST00000415164 RNF185Q96GF1 192 aa12.26□□□□□ -0.45
UBXN4-202ENST00000415164 TNXBP22105 4242 aa12.26□□□□□ -0.45
UBXN4-202ENST00000415164 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
UBXN4-202ENST00000415164 AMTP48728 403 aa12.25□□□□□ -0.45
UBXN4-202ENST00000415164 CACNG7P62955 275 aa12.25□□□□□ -0.45
UBXN4-202ENST00000415164 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
UBXN4-202ENST00000415164 IGKV2-24A0A0C4DH68 120 aa12.24□□□□□ -0.45
UBXN4-202ENST00000415164 A0A1B0GUV1 79 aa12.24□□□□□ -0.45
UBXN4-202ENST00000415164 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
UBXN4-202ENST00000415164 COX6A2Q02221 97 aa12.24□□□□□ -0.45
UBXN4-202ENST00000415164 MAJINQ3KP22 176 aa12.24□□□□□ -0.45
UBXN4-202ENST00000415164 CENPWQ5EE01 88 aa12.24□□□□□ -0.45
UBXN4-202ENST00000415164 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
UBXN4-202ENST00000415164 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms