RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TSKUQ8WUA8 353 aa10□□□□□ -0.81
CHD1-202ENST00000414220 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
CHD1-202ENST00000414220 PKIAP61925 76 aa9.99□□□□□ -0.81
CHD1-202ENST00000414220 RPL23P62829 140 aaKnown RBP9.99□□□□□ -0.81
CHD1-202ENST00000414220 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
CHD1-202ENST00000414220 ISOC2Q96AB3 205 aa9.99□□□□□ -0.81
CHD1-202ENST00000414220 PGLYRP4Q96LB8 373 aa9.99□□□□□ -0.81
CHD1-202ENST00000414220 Q9UF83 564 aa9.99□□□□□ -0.81
CHD1-202ENST00000414220 A0A087WX48 190 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 TNP2Q05952 138 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 ELOBQ15370 118 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 SUMO4Q6EEV6 95 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 RASL11AQ6T310 242 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 FRZBQ92765 325 aa9.98□□□□□ -0.81
CHD1-202ENST00000414220 A0A1B0GUT8 65 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 HIGD1CA8MV81 97 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 C9JQL5 133 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 TMEM262E9PQX1 116 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 M0QY20 66 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 PSCAO43653 123 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 SRSF3P84103 164 aaKnown RBP9.97□□□□□ -0.81
CHD1-202ENST00000414220 CLLU1Q5K131 121 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 CHCHD7Q9BUK0 85 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 NIT2Q9NQR4 276 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 DNAH10Q8IVF4 4471 aa9.97□□□□□ -0.81
CHD1-202ENST00000414220 TRBV6-8A0A0A6YYG3 113 aa9.96□□□□□ -0.82
CHD1-202ENST00000414220 A0A1B0GVY2 172 aa9.96□□□□□ -0.82
CHD1-202ENST00000414220 RIGQ13278 110 aa9.96□□□□□ -0.82
CHD1-202ENST00000414220 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.82
CHD1-202ENST00000414220 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
CHD1-202ENST00000414220 LAGE3Q14657 143 aa9.95□□□□□ -0.82
CHD1-202ENST00000414220 TM2D2Q9BX73 214 aa9.95□□□□□ -0.82
CHD1-202ENST00000414220 V9GYV3 84 aa9.95□□□□□ -0.82
CHD1-202ENST00000414220 TRBV25-1A0A075B6N4 114 aa9.94□□□□□ -0.82
CHD1-202ENST00000414220 RMI2Q96E14 147 aa9.94□□□□□ -0.82
CHD1-202ENST00000414220 CHCHD5Q9BSY4 110 aa9.94□□□□□ -0.82
CHD1-202ENST00000414220 COX11Q9Y6N1 276 aa9.94□□□□□ -0.82
CHD1-202ENST00000414220 PNRC1Q12796 327 aaPredicted RBP9.93□□□□□ -0.82
CHD1-202ENST00000414220 NIT1Q86X76 327 aa9.93□□□□□ -0.82
CHD1-202ENST00000414220 TMEM191AQ9H0A3 160 aa9.93□□□□□ -0.82
CHD1-202ENST00000414220 Q9HAA7 133 aa9.93□□□□□ -0.82
CHD1-202ENST00000414220 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
CHD1-202ENST00000414220 IGHV1-24A0A0C4DH33 117 aa9.92□□□□□ -0.82
CHD1-202ENST00000414220 PPP1R2P9O14990 202 aa9.92□□□□□ -0.82
CHD1-202ENST00000414220 Q6ZRN7 208 aaPredicted RBP9.92□□□□□ -0.82
CHD1-202ENST00000414220 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
CHD1-202ENST00000414220 A0A1B0GW15 77 aa9.91□□□□□ -0.82
CHD1-202ENST00000414220 S100A8P05109 93 aa9.91□□□□□ -0.82
CHD1-202ENST00000414220 Q0VG73 95 aa9.91□□□□□ -0.82
CHD1-202ENST00000414220 COTL1Q14019 142 aa9.91□□□□□ -0.82
CHD1-202ENST00000414220 DNAH2Q9P225 4427 aa9.9□□□□□ -0.82
CHD1-202ENST00000414220 CRPP02741 224 aa9.9□□□□□ -0.82
CHD1-202ENST00000414220 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
CHD1-202ENST00000414220 GATD1Q8NB37 220 aa9.9□□□□□ -0.82
CHD1-202ENST00000414220 PGPEP1Q9NXJ5 209 aa9.9□□□□□ -0.82
CHD1-202ENST00000414220 SMIM27A0A1W2PRY6 76 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 UBE2L6O14933 153 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 PPP1R17O96001 155 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 MT-ND4LP03901 98 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 SPATA12Q7Z6I5 190 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 MRAP2Q96G30 205 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 KLK12Q9UKR0 248 aa9.89□□□□□ -0.83
CHD1-202ENST00000414220 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
CHD1-202ENST00000414220 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
CHD1-202ENST00000414220 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
CHD1-202ENST00000414220 TMEM243Q9BU79 118 aa9.88□□□□□ -0.83
CHD1-202ENST00000414220 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 A0A087WTM6 91 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 NCR2O95944 276 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 ANGP03950 147 aaKnown RBP9.87□□□□□ -0.83
CHD1-202ENST00000414220 AMTP48728 403 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 IFITM2Q01629 132 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 GAGE6Q13070 117 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
CHD1-202ENST00000414220 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 F8W036 122 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 RAB4AP20338 218 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 PMCHP20382 165 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 CAMPP49913 170 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 CDPF1Q6NVV7 123 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 ATRAIDQ6UW56 229 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 Q8N3U1 123 aa9.86□□□□□ -0.83
CHD1-202ENST00000414220 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 IGKV2D-24A0A075B6R9 120 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 I3L3M4 83 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 MPV17L2Q567V2 206 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 AMN1Q8IY45 258 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 RPL39LQ96EH5 51 aaKnown RBP9.85□□□□□ -0.83
CHD1-202ENST00000414220 C1orf43Q9BWL3 253 aa9.85□□□□□ -0.83
CHD1-202ENST00000414220 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms