RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 P0DMU3 169 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 DEFB136Q30KP8 78 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 DOPEY2Q9Y3R5 2298 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 WFDC2Q14508 124 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 RHOHQ15669 191 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
GRAMD1A-202ENST00000411896 TRGV11A0A075B6L2 103 aa12.34□□□□□ -0.43
GRAMD1A-202ENST00000411896 A0A0J9YY99 117 aa12.34□□□□□ -0.43
GRAMD1A-202ENST00000411896 SRSF9Q13242 221 aaKnown RBP eCLIP12.34□□□□□ -0.43
GRAMD1A-202ENST00000411896 MTURNQ8N3F0 131 aa12.34□□□□□ -0.43
GRAMD1A-202ENST00000411896 GEMIN7Q9H840 131 aaKnown RBP12.34□□□□□ -0.43
GRAMD1A-202ENST00000411896 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
GRAMD1A-202ENST00000411896 ZANQ9Y493 2812 aa12.33□□□□□ -0.44
GRAMD1A-202ENST00000411896 UBE2D1P51668 147 aa12.33□□□□□ -0.44
GRAMD1A-202ENST00000411896 DEFB131AP59861 70 aa12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 USP9YO00507 2555 aaPredicted RBP12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 F8W1H4 67 aa12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 HTN1P15515 57 aa12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 AMELXQ99217 191 aa12.32□□□□□ -0.44
GRAMD1A-202ENST00000411896 SORL1Q92673 2214 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 I3L3M4 83 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 PRM2P04554 102 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 KRTAP10-9P60411 292 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 J3QR89 54 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 TSPAN13O95857 204 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
GRAMD1A-202ENST00000411896 POLQO75417 2590 aa12.3□□□□□ -0.44
GRAMD1A-202ENST00000411896 PROK1P58294 105 aa12.3□□□□□ -0.44
GRAMD1A-202ENST00000411896 MRPL16Q9NX20 251 aaKnown RBP12.3□□□□□ -0.44
GRAMD1A-202ENST00000411896 PRO0461Q9UI25 63 aa12.3□□□□□ -0.44
GRAMD1A-202ENST00000411896 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
GRAMD1A-202ENST00000411896 CR1P17927 2039 aa12.29□□□□□ -0.44
GRAMD1A-202ENST00000411896 J3QQQ9 107 aa12.29□□□□□ -0.44
GRAMD1A-202ENST00000411896 MYO18BQ8IUG5 2567 aa12.29□□□□□ -0.44
GRAMD1A-202ENST00000411896 H3BMM0 161 aa12.29□□□□□ -0.44
GRAMD1A-202ENST00000411896 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
GRAMD1A-202ENST00000411896 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
GRAMD1A-202ENST00000411896 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 A8MTW9 85 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 APOMO95445 188 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 HIST2H2BDQ6DRA6 164 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 TMEM223A0PJW6 202 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
GRAMD1A-202ENST00000411896 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 SFTA2Q6UW10 78 aa12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 A0A0J9YXV3 536 aa12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.45
GRAMD1A-202ENST00000411896 ETDBQ3ZM63 59 aa12.26□□□□□ -0.45
GRAMD1A-202ENST00000411896 Q8N2B8 174 aa12.26□□□□□ -0.45
GRAMD1A-202ENST00000411896 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
GRAMD1A-202ENST00000411896 LEPROTO15243 131 aa12.26□□□□□ -0.45
GRAMD1A-202ENST00000411896 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
GRAMD1A-202ENST00000411896 EDA2RQ9HAV5 297 aa12.26□□□□□ -0.45
GRAMD1A-202ENST00000411896 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
GRAMD1A-202ENST00000411896 Q9UF83 564 aa12.25□□□□□ -0.45
GRAMD1A-202ENST00000411896 MXRA5Q9NR99 2828 aa12.25□□□□□ -0.45
GRAMD1A-202ENST00000411896 ACACBO00763 2458 aa12.25□□□□□ -0.45
GRAMD1A-202ENST00000411896 RHODO00212 210 aa12.25□□□□□ -0.45
GRAMD1A-202ENST00000411896 VCX2Q9H322 139 aa12.25□□□□□ -0.45
GRAMD1A-202ENST00000411896 CFC1BP0CG36 223 aa12.24□□□□□ -0.45
GRAMD1A-202ENST00000411896 CFC1P0CG37 223 aa12.24□□□□□ -0.45
GRAMD1A-202ENST00000411896 Q6ZSN1 163 aa12.24□□□□□ -0.45
GRAMD1A-202ENST00000411896 KHDC1LQ5JSQ8 128 aa12.24□□□□□ -0.45
GRAMD1A-202ENST00000411896 SPAG8Q99932 426 aaPredicted RBP12.24□□□□□ -0.45
GRAMD1A-202ENST00000411896 MAP6D1Q9H9H5 199 aa12.24□□□□□ -0.45
GRAMD1A-202ENST00000411896 LOC107984156A0A0G2JMH3 177 aa12.23□□□□□ -0.45
GRAMD1A-202ENST00000411896 M0R2P5 195 aa12.23□□□□□ -0.45
GRAMD1A-202ENST00000411896 CD28P10747 220 aa12.23□□□□□ -0.45
GRAMD1A-202ENST00000411896 ARL17AQ8IVW1 177 aa12.23□□□□□ -0.45
GRAMD1A-202ENST00000411896 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
GRAMD1A-202ENST00000411896 UBE2D3P61077 147 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 UBE2D2P62837 147 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 CEMP1Q6PRD7 247 aaPredicted RBP12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 C4orf3Q8WVX3 66 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 PEMTQ9UBM1 199 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 FAM208BQ5VWN6 2430 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 TRAV2A0A0B4J234 112 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 PSMB2P49721 201 aa12.22□□□□□ -0.45
GRAMD1A-202ENST00000411896 SMCPP49901 116 aaPredicted RBP12.21□□□□□ -0.45
GRAMD1A-202ENST00000411896 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
GRAMD1A-202ENST00000411896 Q96MF0 132 aa12.21□□□□□ -0.45
GRAMD1A-202ENST00000411896 TNFRSF18Q9Y5U5 241 aa12.21□□□□□ -0.45
GRAMD1A-202ENST00000411896 A8MWV9 139 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms