RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 A0A1B0GXF2 115 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 K7EQG2 157 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 UQCRQO14949 82 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 PROP1O75360 226 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 CST7O76096 145 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 LEPROTL1O95214 131 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 NCR2O95944 276 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 IGKV1-13P0DP09 117 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 TRPT1Q86TN4 253 aaKnown RBP3.4□□□□□ -1.87
SF3B1-202ENST00000409915 Q8N6K4 173 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 C5orf56Q8N8D9 126 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 C16orf95Q9H693 158 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 TP73-AS1Q9UF72 201 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 PRNDQ9UKY0 176 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 IGHV4-4A0A075B6R2 117 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 TRAV5A0A0B4J249 113 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 TCRBV4S1A1TA0A5B7 111 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 SSSCA1O60232 199 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 SNCGO76070 127 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 IGLV2-14P01704 120 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 IGKV1-16P04430 117 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 CD28P10747 220 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 CRYGAP11844 174 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 HLA-DMBP28068 263 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 MYCNOSP40205 109 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 FXYD4P59646 89 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 CACNG7P62955 275 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 NDPQ00604 133 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 EBI3Q14213 229 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 Q5XG85 94 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-202ENST00000409915 TMEM14EPQ6UXP3 125 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 ZNF329Q86UD4 541 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 Q8N2B8 174 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 C6orf223Q8N319 242 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 Q8N9W7 124 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 NAA38Q9BRA0 125 aaKnown RBP3.39□□□□□ -1.87
SF3B1-202ENST00000409915 ZNF747Q9BV97 191 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 FBXL15Q9H469 300 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 ZNF331Q9NQX6 463 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-202ENST00000409915 C21orf62Q9NYP8 219 aa3.39□□□□□ -1.87
SF3B1-202ENST00000409915 PKD1L1Q8TDX9 2849 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 TRAV4A0A0B4J268 109 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 LOC107984640A0A0U1RRK4 108 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 C3orf85A0A1B0GTC6 90 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 TEX50A0A1B0GTY4 177 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 IGLC6P0CF74 106 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 FXYD2P54710 66 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 EMP1P54849 157 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 UBE2D3P61077 147 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 UBE2D2P62837 147 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 RPL30P62888 115 aaKnown RBP3.38□□□□□ -1.87
SF3B1-202ENST00000409915 HERVK_113P63121 156 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 PLGLAQ15195 96 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 CEND1Q8N111 149 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 Q8N1X5 172 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 TMEM190Q8WZ59 177 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 RAB37Q96AX2 223 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 HIST1H4GQ99525 98 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 CCL28Q9NRJ3 127 aa3.38□□□□□ -1.87
SF3B1-202ENST00000409915 NBEAL1Q6ZS30 2694 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 MGAM2Q2M2H8 2515 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 FBN3Q75N90 2809 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 IGHV3OR16-13A0A075B7E8 117 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 IGHV7-81A0A0B4J1V7 117 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 G3V318 75 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 NDUFA3O95167 84 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 IGLV2-23P01705 113 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 IGHG2P01859 326 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 APELAP0DMC3 54 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 TMEM258P61165 79 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 RTL8BQ17RB0 113 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 C12orf74Q32Q52 190 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 SP6Q3SY56 376 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 GDF5OSQ5U4N7 250 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 LYRM7Q5U5X0 104 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 ZNF818PQ6ZRF7 136 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 C18orf65Q6ZTR6 163 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 LINC00173Q6ZV60 143 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 POM121L12Q8N7R1 296 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 NPBQ8NG41 125 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 FAM19A4Q96LR4 140 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 TMEM147Q9BVK8 224 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 XCL2Q9UBD3 114 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
SF3B1-202ENST00000409915 WNK1Q9H4A3 2382 aa3.36□□□□□ -1.87
SF3B1-202ENST00000409915 PMS2P5A8MQ11 134 aa3.36□□□□□ -1.87
SF3B1-202ENST00000409915 SYNGR2O43760 224 aa3.36□□□□□ -1.87
SF3B1-202ENST00000409915 IGLV2-8P01709 118 aa3.36□□□□□ -1.87
SF3B1-202ENST00000409915 SAA1P0DJI8 122 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-202ENST00000409915 PSMB8P28062 276 aa3.36□□□□□ -1.87
SF3B1-202ENST00000409915 SLC38A11Q08AI6 406 aa3.36□□□□□ -1.87
SF3B1-202ENST00000409915 EIF4EBP1Q13541 118 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms