RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 TRPT1Q86TN4 253 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-202ENST00000409364 JPT2Q9H910 190 aa4.59□□□□□ -1.67
GTF3C3-202ENST00000409364 F8P00451 2351 aa4.59□□□□□ -1.68
GTF3C3-202ENST00000409364 WNK1Q9H4A3 2382 aa4.59□□□□□ -1.68
GTF3C3-202ENST00000409364 ANK3Q12955 4377 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 A0A087WWL8 130 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 A8MWV9 139 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 TCAPO15273 167 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 NUDT3O95989 172 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 PRSS1P07477 247 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 IGLL1P15814 213 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 POLR2KP53803 58 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 KRTAP10-3P60369 221 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 SUMO4Q6EEV6 95 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 MRPL52Q86TS9 123 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 RPL39LQ96EH5 51 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 KIR2DL4Q99706 377 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 TMEM208Q9BTX3 173 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 CSTL1Q9H114 145 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 GOLT1BQ9Y3E0 138 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 H7C1H1 209 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 M0QY20 66 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 M0R143 59 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 FAM74A4Q5TZK3 123 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 MORN3Q6PF18 240 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 LINC00482Q8N8I6 264 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 XCL2Q9UBD3 114 aa4.58□□□□□ -1.68
GTF3C3-202ENST00000409364 TRBV27A0A0K0K1C4 114 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 ZNF56Q15929 161 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 TOMM6Q96B49 74 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 C18orf15Q96N68 181 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 SCGB3A1Q96QR1 104 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 MCRIP2Q9BUT9 160 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 EDA2RQ9HAV5 297 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 C19orf73Q9NVV2 129 aa4.57□□□□□ -1.68
GTF3C3-202ENST00000409364 AGRNO00468 2067 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 FN1P02751 2386 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 MAST4O15021 2626 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 RHODO00212 210 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 C9orf66Q5T8R8 295 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 Q6ZN92 141 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 ERASQ7Z444 233 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 C1orf158Q8N1D5 194 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 C11orf72Q8NBR9 251 aa4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 MRPS16Q9Y3D3 137 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 TEP1Q99973 2627 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-202ENST00000409364 TRAV12-1A0A0B4J245 112 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 hDV102S1A0JD36 115 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 EREGO14944 169 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 HNRNPA3P51991 378 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 SLC25A34Q6PIV7 304 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 C2orf66Q6UXQ4 117 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 ZFP2Q6ZN57 461 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 CITED1Q99966 193 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 PMCHL2Q9BQD1 86 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 C2orf88Q9BSF0 95 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 ZMAT4Q9H898 229 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 CYSLTR1Q9Y271 337 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 MUC4Q99102 2169 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 IGHV3OR16-12A0A075B7B8 117 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 A0A087WX48 190 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 I3L3M4 83 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 RS1O15537 224 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 DPM2O94777 84 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 IGKCP01834 107 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 PRM2P04554 102 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 AZU1P20160 251 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 CFAP126Q5VTH2 177 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 UFSP1Q6NVU6 142 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 GTSCR1Q86UQ5 136 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 TMEM263Q8WUH6 116 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 TMEM141Q96I45 108 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 DKK2Q9UBU2 259 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 TNFRSF18Q9Y5U5 241 aa4.55□□□□□ -1.68
GTF3C3-202ENST00000409364 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 COX8AP10176 69 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 PLNP26678 52 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 RIPPLY3P57055 190 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 DAZ2Q13117 558 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 RHOHQ15669 191 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 RNASE8Q8TDE3 154 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 DNAJC30Q96LL9 226 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 SNHG12Q9BXW3 62 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 HHLA3Q9XRX5 114 aa4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 NSD1Q96L73 2696 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-202ENST00000409364 IGHV3-53P01767 116 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 RPL35AP18077 110 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 NEGR1Q7Z3B1 354 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 STPG4Q8N801 248 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 NEXN-AS1Q8NBZ9 246 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 CSNK1G2-AS1Q8NCQ2 148 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 WFDC9Q8NEX5 89 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 OR4C5Q8NGB2 326 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 IL17DQ8TAD2 202 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 C16orf74Q96GX8 76 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms