RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 RNF183Q96D59 192 aa7.42□□□□□ -1.22
SNORD88C-201ENST00000408061 VWFP04275 2813 aa7.42□□□□□ -1.22
SNORD88C-201ENST00000408061 TEX48A0A1B0GUV7 120 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 PLAC8L1A1L4L8 177 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 SDHAF1A6NFY7 115 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 KRTDAPP60985 99 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 RHOHQ15669 191 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 SAMD5Q5TGI4 173 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 NOP10Q9NPE3 64 aaKnown RBP7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 MRPL16Q9NX20 251 aaKnown RBP7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 TNFRSF18Q9Y5U5 241 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 X6R8D5 127 aa7.41□□□□□ -1.22
SNORD88C-201ENST00000408061 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
SNORD88C-201ENST00000408061 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.22
SNORD88C-201ENST00000408061 I3L3M4 83 aa7.4□□□□□ -1.22
SNORD88C-201ENST00000408061 PRM2P04554 102 aa7.4□□□□□ -1.22
SNORD88C-201ENST00000408061 NACAE9PAV3 2078 aa7.4□□□□□ -1.23
SNORD88C-201ENST00000408061 FBN1P35555 2871 aaKnown RBP7.4□□□□□ -1.23
SNORD88C-201ENST00000408061 STAB1Q9NY15 2570 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 TRGV2A0A075B6R0 118 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 A0A096LNJ9 63 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 NUDT3O95989 172 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 RIPPLY3P57055 190 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 Q6ZTI0 123 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 TOMM6Q96B49 74 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 IFI27L1Q96BM0 104 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 COL6A5A8TX70 2615 aa7.39□□□□□ -1.23
SNORD88C-201ENST00000408061 NPSP0C0P6 89 aa7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 KRTAP10-11P60412 298 aa7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 LGALS9CQ6DKI2 356 aa7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 OR11H2Q8NH07 326 aa7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
SNORD88C-201ENST00000408061 TRBV7-3A0A075B6L6 115 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 GAGE12BA1L429 117 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 GAGE7O76087 117 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 GAGE12FP0CL80 117 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 GAGE12GP0CL81 117 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 GAGE12IP0CL82 117 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 DEFB135Q30KP9 77 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 KPRPQ5T749 579 aaPredicted RBP7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 LINC01545Q5VT33 79 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 ERASQ7Z444 233 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 DAZ4Q86SG3 579 aaKnown RBP7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 TMEM141Q96I45 108 aa7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 DAZ3Q9NR90 486 aaKnown RBP7.37□□□□□ -1.23
SNORD88C-201ENST00000408061 K7EQD1 137 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 CRYBA4P53673 196 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 TMEM97Q5BJF2 176 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 PAPPA-AS1Q5QFB9 102 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 C2orf66Q6UXQ4 117 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 NEXN-AS1Q8NBZ9 246 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 ZNF479Q96JC4 524 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 PRADC1Q9BSG0 188 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 ZMAT4Q9H898 229 aa7.36□□□□□ -1.23
SNORD88C-201ENST00000408061 IGHV3-73A0A0B4J1V6 119 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 TRAV12-1A0A0B4J245 112 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 TRGV4A0A0C4DH28 118 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 Q6ZN92 141 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 Q8N976 141 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 TIMM17AQ99595 171 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
SNORD88C-201ENST00000408061 IGHV4-28A0A0C4DH34 117 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 G3V4G9 280 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 TSTD3H0UI37 97 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 TSHBP01222 138 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 PRSS1P07477 247 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 PKIAP61925 76 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 COTL1Q14019 142 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 FHL2Q14192 279 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 Q6ZSN1 163 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 SLC25A29Q8N8R3 303 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 Q8NAQ8 132 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 C20orf203Q8NBC4 194 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 GTSF1LQ9H1H1 148 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 DKK2Q9UBU2 259 aa7.34□□□□□ -1.23
SNORD88C-201ENST00000408061 TRAV9-2A0A087WT02 112 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 HSBP1L1C9JCN9 74 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 FAM222AQ5U5X8 452 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 HHLA3Q9XRX5 114 aa7.33□□□□□ -1.24
SNORD88C-201ENST00000408061 IGIPA6NJ69 53 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 H7C423 109 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 ATP5G1P05496 136 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 EMP1P54849 157 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 UBE2D3P61077 147 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 DAD1P61803 113 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 UBE2D2P62837 147 aa7.32□□□□□ -1.24
SNORD88C-201ENST00000408061 ZNRF2Q8NHG8 242 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms