RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 RBMY1BA6NDE4 496 aaKnown RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 RBMY1EA6NEQ0 496 aaKnown RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 RBMY1DP0C7P1 496 aaKnown RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 RRN3P1Q2M238 152 aa7.24□□□□□ -1.25
MSH2-202ENST00000406134 FAM159AQ6UWV7 190 aa7.24□□□□□ -1.25
MSH2-202ENST00000406134 OPRPNQ99935 248 aaPredicted RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 SPANXB1Q9NS25 103 aaPredicted RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 CYSLTR1Q9Y271 337 aa7.24□□□□□ -1.25
MSH2-202ENST00000406134 PRRC2AP48634 2157 aaKnown RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
MSH2-202ENST00000406134 WFDC2Q14508 124 aa7.24□□□□□ -1.25
MSH2-202ENST00000406134 ZNF256Q9Y2P7 627 aaPredicted RBP7.24□□□□□ -1.25
MSH2-202ENST00000406134 A8MTW9 85 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 OR11H12B2RN74 326 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 OR11H1Q8NG94 326 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 OR11H2Q8NH07 326 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 HIST1H4GQ99525 98 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 TIMM17AQ99595 171 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 Q9UF83 564 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 A0A0J9YY99 117 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
MSH2-202ENST00000406134 SPINK13Q1W4C9 94 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 NSUN5P1Q3KNT7 163 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 TMEM89A2RUT3 159 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 B5MCH6 92 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 H3BMG7 143 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 IGKV3-20P01619 116 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 PRM2P04554 102 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 DUX5Q96PT3 197 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 SORL1Q92673 2214 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 CHD6Q8TD26 2715 aa7.23□□□□□ -1.25
MSH2-202ENST00000406134 ID1P41134 155 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 SYNJ2BPP57105 145 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 PPP1R17O96001 155 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 PMVKQ15126 192 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 ZNF815PA8K554 130 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
MSH2-202ENST00000406134 NFE4Q86UQ8 179 aa7.21□□□□□ -1.25
MSH2-202ENST00000406134 LINC01356Q8N9X3 169 aa7.21□□□□□ -1.25
MSH2-202ENST00000406134 RNF183Q96D59 192 aa7.21□□□□□ -1.25
MSH2-202ENST00000406134 ABCA12Q86UK0 2595 aa7.21□□□□□ -1.25
MSH2-202ENST00000406134 VCYO14598 125 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 TSPAN13O95857 204 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 IGHV3-30P01768 117 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 IGHV3-30-5P0DP03 117 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.26
MSH2-202ENST00000406134 PROK1P58294 105 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 Q6YL49 198 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 IGHV1OR15-1A0A075B7D0 117 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 HIST2H2BDQ6DRA6 164 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 TMEM141Q96I45 108 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 EDA2RQ9HAV5 297 aa7.21□□□□□ -1.26
MSH2-202ENST00000406134 SETXQ7Z333 2677 aaKnown RBP7.2□□□□□ -1.26
MSH2-202ENST00000406134 INSL3P51460 131 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 UBE2D3P61077 147 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 UBE2D2P62837 147 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 MRPL16Q9NX20 251 aaKnown RBP7.2□□□□□ -1.26
MSH2-202ENST00000406134 KRTAP10-9P60411 292 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 VPREB3Q9UKI3 123 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 Q6ZSN1 163 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 NAV2Q8IVL1 2488 aa7.2□□□□□ -1.26
MSH2-202ENST00000406134 FASNP49327 2511 aaKnown RBP7.19□□□□□ -1.26
MSH2-202ENST00000406134 PDZD2O15018 2839 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 DEFB136Q30KP8 78 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 F8W1H4 67 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 IGHV4-31P0DP07 118 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 SLURP1P55000 103 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 KRTAP1-3Q8IUG1 177 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 IGLV4-3A0A075B6K6 122 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 Q8N2B8 174 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 SLC25A29Q8N8R3 303 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 DLX4Q92988 240 aaPredicted RBP7.19□□□□□ -1.26
MSH2-202ENST00000406134 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 ANAPC13Q9BS18 74 aa7.19□□□□□ -1.26
MSH2-202ENST00000406134 CFC1BP0CG36 223 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 CFC1P0CG37 223 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 C20orf203Q8NBC4 194 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 BBC3Q96PG8 261 aaPredicted RBP7.18□□□□□ -1.26
MSH2-202ENST00000406134 KNCNA6PVL3 124 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 PRB1P04280 392 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
MSH2-202ENST00000406134 DSCR9P59020 149 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 CFAP126Q5VTH2 177 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 NDUFA11Q86Y39 141 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 LINC01549A6NIU2 74 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 SNRPD3P62318 126 aaKnown RBP7.18□□□□□ -1.26
MSH2-202ENST00000406134 FHL3Q13643 280 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 RHOHQ15669 191 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 SPAG8Q99932 426 aaPredicted RBP7.18□□□□□ -1.26
MSH2-202ENST00000406134 FAM110AQ9BQ89 295 aa7.18□□□□□ -1.26
MSH2-202ENST00000406134 J3QLI3 93 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
MSH2-202ENST00000406134 ZNF56Q15929 161 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms