RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TRBV6-5A0A0K0K1A5 114 aa15.05■□□□□ -0
TPM1-208ENST00000404484 K7EMI3 77 aa15.05■□□□□ -0
TPM1-208ENST00000404484 M0QY20 66 aa15.05■□□□□ -0
TPM1-208ENST00000404484 SMIM6P0DI80 62 aa15.04■□□□□ -0
TPM1-208ENST00000404484 OR11H2Q8NH07 326 aa15.04■□□□□ -0
TPM1-208ENST00000404484 RNF183Q96D59 192 aa15.04■□□□□ -0
TPM1-208ENST00000404484 IGLV2-18A0A075B6J9 118 aa15.03■□□□□ -0
TPM1-208ENST00000404484 NIT2Q9NQR4 276 aa15.03■□□□□ -0
TPM1-208ENST00000404484 MIFP14174 115 aa15.02■□□□□ -0
TPM1-208ENST00000404484 IGHV3-73A0A0B4J1V6 119 aa15.02□□□□□ -0.01
TPM1-208ENST00000404484 IGHV3-53P01767 116 aa15.02□□□□□ -0.01
TPM1-208ENST00000404484 TRGV2A0A075B6R0 118 aa15.01□□□□□ -0.01
TPM1-208ENST00000404484 LEPROTL1O95214 131 aa15.01□□□□□ -0.01
TPM1-208ENST00000404484 HBDP02042 147 aa15.01□□□□□ -0.01
TPM1-208ENST00000404484 HSPB8Q9UJY1 196 aa15.01□□□□□ -0.01
TPM1-208ENST00000404484 TP53TG1Q9Y2A0 90 aa15.01□□□□□ -0.01
TPM1-208ENST00000404484 GAGE12BA1L429 117 aa15□□□□□ -0.01
TPM1-208ENST00000404484 VCYO14598 125 aa15□□□□□ -0.01
TPM1-208ENST00000404484 GAGE7O76087 117 aa15□□□□□ -0.01
TPM1-208ENST00000404484 GAGE12FP0CL80 117 aa15□□□□□ -0.01
TPM1-208ENST00000404484 GAGE12GP0CL81 117 aa15□□□□□ -0.01
TPM1-208ENST00000404484 GAGE12IP0CL82 117 aa15□□□□□ -0.01
TPM1-208ENST00000404484 EMP1P54849 157 aa15□□□□□ -0.01
TPM1-208ENST00000404484 LAGE3Q14657 143 aa15□□□□□ -0.01
TPM1-208ENST00000404484 PMCHL1Q16048 86 aa15□□□□□ -0.01
TPM1-208ENST00000404484 LYRM9A8MSI8 78 aa14.99□□□□□ -0.01
TPM1-208ENST00000404484 ORMDL2Q53FV1 153 aa14.99□□□□□ -0.01
TPM1-208ENST00000404484 SBSPONQ8IVN8 264 aa14.99□□□□□ -0.01
TPM1-208ENST00000404484 TMEM70Q9BUB7 260 aa14.99□□□□□ -0.01
TPM1-208ENST00000404484 NACAE9PAV3 2078 aa14.99□□□□□ -0.01
TPM1-208ENST00000404484 SDHAF1A6NFY7 115 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 POLR2KP53803 58 aaKnown RBP14.98□□□□□ -0.01
TPM1-208ENST00000404484 DNAJC30Q96LL9 226 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 TCAPO15273 167 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 FCER1GP30273 86 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 JOSD1Q15040 202 aaPredicted RBP14.98□□□□□ -0.01
TPM1-208ENST00000404484 LINC00612Q8N6U2 182 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 C18orf15Q96N68 181 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 KIR2DL4Q99706 377 aa14.98□□□□□ -0.01
TPM1-208ENST00000404484 TRBV27A0A0K0K1C4 114 aa14.97□□□□□ -0.01
TPM1-208ENST00000404484 NHLRC4P0CG21 123 aaPredicted RBP14.97□□□□□ -0.01
TPM1-208ENST00000404484 PYY3Q5JQD4 70 aa14.97□□□□□ -0.01
TPM1-208ENST00000404484 LINC00518Q8N0U6 118 aa14.97□□□□□ -0.01
TPM1-208ENST00000404484 ZNF479Q96JC4 524 aa14.97□□□□□ -0.01
TPM1-208ENST00000404484 TNFRSF18Q9Y5U5 241 aa14.97□□□□□ -0.01
TPM1-208ENST00000404484 HUWE1Q7Z6Z7 4374 aaKnown RBP14.96□□□□□ -0.01
TPM1-208ENST00000404484 IGHV4-28A0A0C4DH34 117 aa14.96□□□□□ -0.01
TPM1-208ENST00000404484 G0S2P27469 103 aa14.96□□□□□ -0.01
TPM1-208ENST00000404484 KRTDAPP60985 99 aa14.96□□□□□ -0.01
TPM1-208ENST00000404484 Q8NAQ8 132 aa14.95□□□□□ -0.02
TPM1-208ENST00000404484 A0A096LNJ9 63 aa14.94□□□□□ -0.02
TPM1-208ENST00000404484 TRBV10-1A0A0K0K1A3 114 aa14.94□□□□□ -0.02
TPM1-208ENST00000404484 Q6ZSN1 163 aa14.94□□□□□ -0.02
TPM1-208ENST00000404484 C12orf57Q99622 126 aa14.94□□□□□ -0.02
TPM1-208ENST00000404484 NUDT3O95989 172 aa14.94□□□□□ -0.02
TPM1-208ENST00000404484 BTF3P20290 206 aaKnown RBP14.94□□□□□ -0.02
TPM1-208ENST00000404484 MAP1LC3CQ9BXW4 147 aa14.94□□□□□ -0.02
TPM1-208ENST00000404484 LINC01549A6NIU2 74 aa14.93□□□□□ -0.02
TPM1-208ENST00000404484 I3L3M4 83 aa14.93□□□□□ -0.02
TPM1-208ENST00000404484 K7EQD1 137 aa14.93□□□□□ -0.02
TPM1-208ENST00000404484 C3orf79P0CE67 100 aa14.93□□□□□ -0.02
TPM1-208ENST00000404484 STAB2Q8WWQ8 2551 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 TRGV4A0A0C4DH28 118 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 TEX48A0A1B0GUV7 120 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 SCGB1D1O95968 90 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 DEFB130BP0DP73 79 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 DEFB130AP0DP74 79 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 FAM222AQ5U5X8 452 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 NEXN-AS1Q8NBZ9 246 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 NBEAL2Q6ZNJ1 2754 aa14.92□□□□□ -0.02
TPM1-208ENST00000404484 P0DMU3 169 aa14.91□□□□□ -0.02
TPM1-208ENST00000404484 FAM231AP0DMU4 169 aa14.91□□□□□ -0.02
TPM1-208ENST00000404484 FAM231CP0DMU5 169 aa14.91□□□□□ -0.02
TPM1-208ENST00000404484 DKK2Q9UBU2 259 aa14.91□□□□□ -0.02
TPM1-208ENST00000404484 TRBV6-4A0A1B0GX49 114 aa14.9□□□□□ -0.02
TPM1-208ENST00000404484 RHOHQ15669 191 aa14.9□□□□□ -0.02
TPM1-208ENST00000404484 NEGR1Q7Z3B1 354 aa14.9□□□□□ -0.02
TPM1-208ENST00000404484 TENM3Q9P273 2699 aa14.9□□□□□ -0.02
TPM1-208ENST00000404484 RPL36AP83881 106 aaKnown RBP14.9□□□□□ -0.02
TPM1-208ENST00000404484 RPL36ALQ969Q0 106 aaKnown RBP14.9□□□□□ -0.02
TPM1-208ENST00000404484 ATP5LO75964 103 aa14.89□□□□□ -0.03
TPM1-208ENST00000404484 SPART-AS1P0CW21 52 aa14.89□□□□□ -0.03
TPM1-208ENST00000404484 SLC25A29Q8N8R3 303 aa14.89□□□□□ -0.03
TPM1-208ENST00000404484 C20orf202A1L168 122 aa14.88□□□□□ -0.03
TPM1-208ENST00000404484 SYS1-DBNDD2H3BUS1 97 aa14.88□□□□□ -0.03
TPM1-208ENST00000404484 PET117Q6UWS5 81 aa14.88□□□□□ -0.03
TPM1-208ENST00000404484 LINC00173Q6ZV60 143 aa14.88□□□□□ -0.03
TPM1-208ENST00000404484 IFI27L1Q96BM0 104 aa14.88□□□□□ -0.03
TPM1-208ENST00000404484 TM2D3Q9BRN9 247 aa14.88□□□□□ -0.03
TPM1-208ENST00000404484 TRBV7-3A0A075B6L6 115 aa14.87□□□□□ -0.03
TPM1-208ENST00000404484 DAD1P61803 113 aa14.87□□□□□ -0.03
TPM1-208ENST00000404484 TOMM6Q96B49 74 aa14.87□□□□□ -0.03
TPM1-208ENST00000404484 PRADC1Q9BSG0 188 aa14.87□□□□□ -0.03
TPM1-208ENST00000404484 DEFB4AO15263 64 aa14.86□□□□□ -0.03
TPM1-208ENST00000404484 FHL2Q14192 279 aa14.86□□□□□ -0.03
TPM1-208ENST00000404484 CYSLTR1Q9Y271 337 aa14.86□□□□□ -0.03
TPM1-208ENST00000404484 TSHBP01222 138 aa14.85□□□□□ -0.03
TPM1-208ENST00000404484 C2orf66Q6UXQ4 117 aa14.85□□□□□ -0.03
TPM1-208ENST00000404484 SPATA12Q7Z6I5 190 aa14.85□□□□□ -0.03
TPM1-208ENST00000404484 ZMAT4Q9H898 229 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms