RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 LYRM7Q5U5X0 104 aa14.77□□□□□ -0.04
CCDC47-202ENST00000403162 TRBV27A0A0K0K1C4 114 aa14.77□□□□□ -0.05
CCDC47-202ENST00000403162 SMCPP49901 116 aaPredicted RBP14.77□□□□□ -0.05
CCDC47-202ENST00000403162 RPL39P62891 51 aaKnown RBP14.77□□□□□ -0.05
CCDC47-202ENST00000403162 FLNAP21333 2647 aaKnown RBP14.76□□□□□ -0.05
CCDC47-202ENST00000403162 SDHAF1A6NFY7 115 aa14.76□□□□□ -0.05
CCDC47-202ENST00000403162 K7EMT4 169 aa14.76□□□□□ -0.05
CCDC47-202ENST00000403162 NDUFA11Q86Y39 141 aa14.76□□□□□ -0.05
CCDC47-202ENST00000403162 MYO9AB2RTY4 2548 aa14.76□□□□□ -0.05
CCDC47-202ENST00000403162 CIDEAO60543 219 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 EMP1P54849 157 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 FOXI1Q12951 378 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 ZNF876PQ49A33 203 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 DCANP1Q8TF63 244 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 A0A087WWL8 130 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 H3BUX3 64 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 ZFHX3Q15911 3703 aa14.75□□□□□ -0.05
CCDC47-202ENST00000403162 BAHCC1Q9P281 2608 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 SLC25A29Q8N8R3 303 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 FLNBO75369 2602 aaKnown RBP14.74□□□□□ -0.05
CCDC47-202ENST00000403162 LOC107984156A0A0G2JMH3 177 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 F5H697 171 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 IGHV3-30P01768 117 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 IGHV3-30-5P0DP03 117 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 SRD5A1P18405 259 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 TSPEAR-AS2P59090 65 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 KRTAP1-1Q07627 177 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 ARL17AQ8IVW1 177 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 C9orf85Q96MD7 179 aa14.74□□□□□ -0.05
CCDC47-202ENST00000403162 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 TEX15Q9BXT5 2789 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 PSMB2P49721 201 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 BLCAPP62952 87 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 ZNRF2Q8NHG8 242 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 ODF3Q96PU9 254 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 TRAV12-3A0A0B4J271 114 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 CFHR3Q02985 330 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 TMEM170BQ5T4T1 132 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 AMELXQ99217 191 aa14.73□□□□□ -0.05
CCDC47-202ENST00000403162 FSHBP01225 129 aa14.72□□□□□ -0.05
CCDC47-202ENST00000403162 Q6ZS46 218 aa14.72□□□□□ -0.05
CCDC47-202ENST00000403162 YAE1D1Q9NRH1 226 aa14.72□□□□□ -0.05
CCDC47-202ENST00000403162 NFE4Q86UQ8 179 aa14.71□□□□□ -0.05
CCDC47-202ENST00000403162 IGHV3-16A0A0C4DH30 117 aa14.71□□□□□ -0.05
CCDC47-202ENST00000403162 CFC1BP0CG36 223 aa14.71□□□□□ -0.05
CCDC47-202ENST00000403162 CFC1P0CG37 223 aa14.71□□□□□ -0.05
CCDC47-202ENST00000403162 EDN2P20800 178 aa14.71□□□□□ -0.05
CCDC47-202ENST00000403162 NSUN5P1Q3KNT7 163 aa14.71□□□□□ -0.05
CCDC47-202ENST00000403162 TRBV20-1A0A075B6N2 111 aa14.7□□□□□ -0.06
CCDC47-202ENST00000403162 J3QQQ9 107 aa14.7□□□□□ -0.06
CCDC47-202ENST00000403162 RHOHQ15669 191 aa14.7□□□□□ -0.06
CCDC47-202ENST00000403162 DEFB104AQ8WTQ1 72 aa14.7□□□□□ -0.06
CCDC47-202ENST00000403162 DEFB112Q30KQ8 113 aa14.69□□□□□ -0.06
CCDC47-202ENST00000403162 SFTA2Q6UW10 78 aa14.69□□□□□ -0.06
CCDC47-202ENST00000403162 C10orf126Q8N4M7 172 aa14.69□□□□□ -0.06
CCDC47-202ENST00000403162 SYT8Q8NBV8 401 aa14.69□□□□□ -0.06
CCDC47-202ENST00000403162 WFDC12Q8WWY7 111 aa14.69□□□□□ -0.06
CCDC47-202ENST00000403162 M0QY20 66 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 SMR3AQ99954 134 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 ZNF580Q9UK33 172 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 OTOGQ6ZRI0 2925 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 ACANP16112 2415 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 LGALS3P17931 250 aaKnown RBP14.68□□□□□ -0.06
CCDC47-202ENST00000403162 FAM74A4Q5TZK3 123 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 TEX29Q8N6K0 151 aa14.68□□□□□ -0.06
CCDC47-202ENST00000403162 A0A1B0GV72 72 aa14.67□□□□□ -0.06
CCDC47-202ENST00000403162 TCL1BO95988 128 aa14.67□□□□□ -0.06
CCDC47-202ENST00000403162 SBSPONQ8IVN8 264 aa14.67□□□□□ -0.06
CCDC47-202ENST00000403162 ZNF256Q9Y2P7 627 aaPredicted RBP14.67□□□□□ -0.06
CCDC47-202ENST00000403162 ZNF56Q15929 161 aa14.67□□□□□ -0.06
CCDC47-202ENST00000403162 TRPT1Q86TN4 253 aaKnown RBP14.67□□□□□ -0.06
CCDC47-202ENST00000403162 ZNF418Q8TF45 676 aaPredicted RBP14.67□□□□□ -0.06
CCDC47-202ENST00000403162 CDIP1Q9H305 208 aa14.67□□□□□ -0.06
CCDC47-202ENST00000403162 MDFICQ9P1T7 246 aa14.67□□□□□ -0.06
CCDC47-202ENST00000403162 TLN2Q9Y4G6 2542 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 A0A0J9YX75 114 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 LEPROTO15243 131 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 TCTEX1D4Q5JR98 221 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 TEN1Q86WV5 123 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 PRO1854Q9UHT4 67 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 TMEM223A0PJW6 202 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 PPDPFLQ8WWR9 84 aa14.66□□□□□ -0.06
CCDC47-202ENST00000403162 Q8N1Y9 231 aa14.65□□□□□ -0.06
CCDC47-202ENST00000403162 ZNF688P0C7X2 276 aa14.64□□□□□ -0.07
CCDC47-202ENST00000403162 LY6G6DO95868 133 aa14.64□□□□□ -0.07
CCDC47-202ENST00000403162 PSMB8P28062 276 aa14.64□□□□□ -0.07
CCDC47-202ENST00000403162 IGHV1OR15-1A0A075B7D0 117 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 P0DMU3 169 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 FAM231AP0DMU4 169 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 FAM231CP0DMU5 169 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 SNRPD3P62318 126 aaKnown RBP14.63□□□□□ -0.07
CCDC47-202ENST00000403162 C20orf203Q8NBC4 194 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 CARD19Q96LW7 228 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 PTH2Q96A98 100 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 VCX2Q9H322 139 aa14.63□□□□□ -0.07
CCDC47-202ENST00000403162 IGHV4-59P01825 116 aa14.62□□□□□ -0.07
CCDC47-202ENST00000403162 OPRPNQ99935 248 aaPredicted RBP14.62□□□□□ -0.07
CCDC47-202ENST00000403162 A8MWV9 139 aa14.61□□□□□ -0.07
CCDC47-202ENST00000403162 K7EQG2 157 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms