RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 UBE2BP63146 152 aa13.85□□□□□ -0.19
COL18A1-204ENST00000400337 LINC00322Q6ZN03 302 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-204ENST00000400337 MYO18BQ8IUG5 2567 aa13.85□□□□□ -0.19
COL18A1-204ENST00000400337 A4D1N5 150 aa13.85□□□□□ -0.19
COL18A1-204ENST00000400337 EIF4EBP1Q13541 118 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-204ENST00000400337 HIST2H2BCQ6DN03 193 aa13.85□□□□□ -0.19
COL18A1-204ENST00000400337 ANKRD29Q8N6D5 301 aa13.84□□□□□ -0.19
COL18A1-204ENST00000400337 SND1-IT1Q9HBX3 110 aa13.84□□□□□ -0.19
COL18A1-204ENST00000400337 IGLV2-8P01709 118 aa13.83□□□□□ -0.19
COL18A1-204ENST00000400337 SH2D6Q7Z4S9 175 aa13.83□□□□□ -0.2
COL18A1-204ENST00000400337 DAND5Q8N907 189 aa13.83□□□□□ -0.2
COL18A1-204ENST00000400337 C15orf53Q8NAA6 179 aa13.83□□□□□ -0.2
COL18A1-204ENST00000400337 TIMM17AQ99595 171 aa13.83□□□□□ -0.2
COL18A1-204ENST00000400337 COX7B2Q8TF08 81 aa13.83□□□□□ -0.2
COL18A1-204ENST00000400337 MAP6D1Q9H9H5 199 aa13.83□□□□□ -0.2
COL18A1-204ENST00000400337 RPL18AQ02543 176 aaKnown RBP13.82□□□□□ -0.2
COL18A1-204ENST00000400337 PIEZO1Q92508 2521 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 CCDC168Q8NDH2 2452 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 CCL18P55774 89 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 CRYBA4P53673 196 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 FXYD2P54710 66 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 ORMDL1Q9P0S3 153 aa13.82□□□□□ -0.2
COL18A1-204ENST00000400337 DEFB105AQ8NG35 78 aa13.81□□□□□ -0.2
COL18A1-204ENST00000400337 NAV2Q8IVL1 2488 aa13.81□□□□□ -0.2
COL18A1-204ENST00000400337 C11orf86A6NJI1 115 aa13.81□□□□□ -0.2
COL18A1-204ENST00000400337 RS1O15537 224 aa13.81□□□□□ -0.2
COL18A1-204ENST00000400337 IGF1P05019 195 aa13.81□□□□□ -0.2
COL18A1-204ENST00000400337 IGF2RP11717 2491 aa13.81□□□□□ -0.2
COL18A1-204ENST00000400337 ALPK3Q96L96 1907 aa13.8□□□□□ -0.2
COL18A1-204ENST00000400337 ODF1Q14990 250 aa13.8□□□□□ -0.2
COL18A1-204ENST00000400337 SPANXDQ9BXN6 97 aa13.8□□□□□ -0.2
COL18A1-204ENST00000400337 PIEZO2Q9H5I5 2752 aa13.8□□□□□ -0.2
COL18A1-204ENST00000400337 FSTL3O95633 263 aa13.8□□□□□ -0.2
COL18A1-204ENST00000400337 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
COL18A1-204ENST00000400337 CRYGBP07316 175 aa13.79□□□□□ -0.2
COL18A1-204ENST00000400337 TMEM263Q8WUH6 116 aaKnown RBP13.79□□□□□ -0.2
COL18A1-204ENST00000400337 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-204ENST00000400337 OPRPNQ99935 248 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-204ENST00000400337 E9PLD3 99 aa13.79□□□□□ -0.2
COL18A1-204ENST00000400337 IGHV4-31P0DP07 118 aa13.79□□□□□ -0.2
COL18A1-204ENST00000400337 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
COL18A1-204ENST00000400337 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
COL18A1-204ENST00000400337 TNRC6AQ8NDV7 1962 aaKnown RBP13.79□□□□□ -0.2
COL18A1-204ENST00000400337 TP53TG3Q9ULZ0 132 aa13.78□□□□□ -0.2
COL18A1-204ENST00000400337 C20orf203Q8NBC4 194 aa13.78□□□□□ -0.2
COL18A1-204ENST00000400337 WFDC11Q8NEX6 87 aa13.78□□□□□ -0.2
COL18A1-204ENST00000400337 Q6YL49 198 aa13.77□□□□□ -0.2
COL18A1-204ENST00000400337 LY6LH3BQJ8 138 aa13.77□□□□□ -0.2
COL18A1-204ENST00000400337 LRRC75A-AS1Q8N1F1 130 aa13.77□□□□□ -0.21
COL18A1-204ENST00000400337 F8W735 103 aaPredicted RBP13.77□□□□□ -0.21
COL18A1-204ENST00000400337 MLST8Q9BVC4 326 aa13.77□□□□□ -0.21
COL18A1-204ENST00000400337 HIGD1BQ9P298 99 aa13.77□□□□□ -0.21
COL18A1-204ENST00000400337 hADV29S1A0JD25 119 aa13.76□□□□□ -0.21
COL18A1-204ENST00000400337 GDF5OSQ5U4N7 250 aa13.76□□□□□ -0.21
COL18A1-204ENST00000400337 CEMP1Q6PRD7 247 aaPredicted RBP13.76□□□□□ -0.21
COL18A1-204ENST00000400337 C11orf71Q6IPW1 123 aa13.76□□□□□ -0.21
COL18A1-204ENST00000400337 SMAD5-AS1Q9Y6J3 95 aa13.76□□□□□ -0.21
COL18A1-204ENST00000400337 ETDCA0A1B0GVM5 59 aa13.75□□□□□ -0.21
COL18A1-204ENST00000400337 EBI3Q14213 229 aa13.75□□□□□ -0.21
COL18A1-204ENST00000400337 SORL1Q92673 2214 aa13.75□□□□□ -0.21
COL18A1-204ENST00000400337 INSL3P51460 131 aa13.75□□□□□ -0.21
COL18A1-204ENST00000400337 KLK12Q9UKR0 248 aa13.75□□□□□ -0.21
COL18A1-204ENST00000400337 P0DMU3 169 aa13.74□□□□□ -0.21
COL18A1-204ENST00000400337 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
COL18A1-204ENST00000400337 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
COL18A1-204ENST00000400337 DSCAMO60469 2012 aa13.74□□□□□ -0.21
COL18A1-204ENST00000400337 TRACP01848 142 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 IGLC6P0CF74 106 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 PRO0255Q9UI72 69 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 H0YGX0 51 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 K7EQG2 157 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 C20orf173Q96LM9 149 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 C10orf142B7Z368 130 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 TAX1BP3O14907 124 aa13.73□□□□□ -0.21
COL18A1-204ENST00000400337 MUC22E2RYF6 1773 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-204ENST00000400337 Q6ZTI0 123 aa13.72□□□□□ -0.21
COL18A1-204ENST00000400337 NUP210LQ5VU65 1888 aa13.72□□□□□ -0.21
COL18A1-204ENST00000400337 NAV3Q8IVL0 2385 aa13.72□□□□□ -0.21
COL18A1-204ENST00000400337 TRBV10-1A0A0K0K1A3 114 aa13.72□□□□□ -0.21
COL18A1-204ENST00000400337 NDUFA1O15239 70 aa13.72□□□□□ -0.21
COL18A1-204ENST00000400337 IGHV1-58A0A0C4DH39 117 aa13.71□□□□□ -0.21
COL18A1-204ENST00000400337 LGALS9O00182 355 aa13.71□□□□□ -0.21
COL18A1-204ENST00000400337 LINC01620Q4KN68 170 aa13.71□□□□□ -0.21
COL18A1-204ENST00000400337 ZFAND3Q9H8U3 227 aa13.71□□□□□ -0.21
COL18A1-204ENST00000400337 Q6ZUT4 128 aa13.71□□□□□ -0.21
COL18A1-204ENST00000400337 SPAG11BQ08648 103 aa13.71□□□□□ -0.22
COL18A1-204ENST00000400337 WFDC2Q14508 124 aa13.71□□□□□ -0.22
COL18A1-204ENST00000400337 ACYP1P07311 99 aa13.7□□□□□ -0.22
COL18A1-204ENST00000400337 C10orf99Q6UWK7 81 aa13.7□□□□□ -0.22
COL18A1-204ENST00000400337 TIRAPP58753 221 aa13.7□□□□□ -0.22
COL18A1-204ENST00000400337 DEFB114Q30KQ6 69 aa13.7□□□□□ -0.22
COL18A1-204ENST00000400337 ABCA2Q9BZC7 2435 aa13.7□□□□□ -0.22
COL18A1-204ENST00000400337 PLXNB1O43157 2135 aa13.7□□□□□ -0.22
COL18A1-204ENST00000400337 NCR3O14931 201 aa13.69□□□□□ -0.22
COL18A1-204ENST00000400337 ODF3Q96PU9 254 aa13.69□□□□□ -0.22
COL18A1-204ENST00000400337 MIR7-3HGQ8N6C7 128 aa13.69□□□□□ -0.22
COL18A1-204ENST00000400337 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
COL18A1-204ENST00000400337 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
COL18A1-204ENST00000400337 TEN1Q86WV5 123 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms