RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 DAND5Q8N907 189 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 IMUPQ9GZP8 106 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 ZNF80P51504 273 aaPredicted RBP6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 V9GYY9 64 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 RNASE8Q8TDE3 154 aaKnown RBP6.3□□□□□ -1.4
SPTLC3-201ENST00000399002 LMO4P61968 165 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 ZFAND3Q9H8U3 227 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 TRAV26-1A0A087WT03 109 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 MIFP14174 115 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 IGHV4-28A0A0C4DH34 117 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 BPY2O14599 106 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 IGHV4-31P0DP07 118 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 ZNF295-AS1Q8N0V1 137 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 Q8NA96 180 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 MUC22E2RYF6 1773 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 IGLV4-3A0A075B6K6 122 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 A0A1W2PNU3 283 aaPredicted RBP6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 GDF5OSQ5U4N7 250 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 DEFB135Q30KP9 77 aa6.29□□□□□ -1.4
SPTLC3-201ENST00000399002 ZNF22P17026 224 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 HILS1P60008 231 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 COX17Q14061 63 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 DEFB114Q30KQ6 69 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 CRIP3Q6Q6R5 217 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 TNRC6BQ9UPQ9 1833 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 FER1L5A0AVI2 2057 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 MSMPQ1L6U9 139 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 CFAP126Q5VTH2 177 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 C3orf22Q8N5N4 141 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 C11orf45Q8TAV5 145 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 RNF185Q96GF1 192 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 C11orf71Q6IPW1 123 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 CHCHD10Q8WYQ3 142 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-201ENST00000399002 C20orf173Q96LM9 149 aa6.27□□□□□ -1.4
SPTLC3-201ENST00000399002 LINC00467Q9BRT7 94 aa6.27□□□□□ -1.4
SPTLC3-201ENST00000399002 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 M0QY20 66 aa6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 ADAMTS9Q9P2N4 1935 aa6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 YLPM1P49750 1951 aaKnown RBP6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 MRGPRG-AS1Q2M3A8 158 aa6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
SPTLC3-201ENST00000399002 FAM236DA0A1B0GTK5 79 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 FAM236CP0DP71 79 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 LINC00322Q6ZN03 302 aaPredicted RBP6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 TP53TG3Q9ULZ0 132 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 ARID1AO14497 2285 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 Q8N6K4 173 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 C2orf16Q68DN1 1984 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 TRBV6-8A0A0A6YYG3 113 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 H0Y9J4 135 aa6.26□□□□□ -1.41
SPTLC3-201ENST00000399002 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
SPTLC3-201ENST00000399002 LINC00269Q8N2A0 174 aa6.25□□□□□ -1.41
SPTLC3-201ENST00000399002 Q6ZPA2 131 aa6.25□□□□□ -1.41
SPTLC3-201ENST00000399002 FAM110AQ9BQ89 295 aa6.25□□□□□ -1.41
SPTLC3-201ENST00000399002 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
SPTLC3-201ENST00000399002 IGLV2-11P01706 119 aa6.24□□□□□ -1.41
SPTLC3-201ENST00000399002 CRYGDP07320 174 aa6.24□□□□□ -1.41
SPTLC3-201ENST00000399002 Q6ZTI0 123 aa6.24□□□□□ -1.41
SPTLC3-201ENST00000399002 HEATR5AQ86XA9 2040 aa6.24□□□□□ -1.41
SPTLC3-201ENST00000399002 FRMD6-AS1P0C7T7 363 aa6.24□□□□□ -1.41
SPTLC3-201ENST00000399002 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
SPTLC3-201ENST00000399002 PHF3Q92576 2039 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 TRAV23DV6A0A075B6W5 121 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 MRPL55Q7Z7F7 128 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 M0R378 163 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 F8WDY8 70 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 TRIAP1O43715 76 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 TSHBP01222 138 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 CRIP1P50238 77 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 SHISA2Q6UWI4 295 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 NRACQ8N912 160 aa6.23□□□□□ -1.41
SPTLC3-201ENST00000399002 LINC01548A6NM66 108 aa6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 CD164L2Q6UWJ8 174 aa6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 KLLNB2CW77 178 aa6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 CEMP1Q6PRD7 247 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
SPTLC3-201ENST00000399002 UBE2D4Q9Y2X8 147 aa6.21□□□□□ -1.41
SPTLC3-201ENST00000399002 URB1O60287 2271 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 TEX49A0A1B0GTD5 131 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 Q6Q795 121 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 ZNF702PQ9H963 129 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 IGLV1-40P01703 118 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 LST1O00453 97 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 BRI3O95415 125 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 IGKV4-1P06312 121 aa6.21□□□□□ -1.42
SPTLC3-201ENST00000399002 LELP1Q5T871 98 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 377.6 ms