RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 Q5PR19 223 aa18.91■□□□□ 0.62
COL13A1-203ENST00000398969 J3QR89 54 aa18.9■□□□□ 0.62
COL13A1-203ENST00000398969 TSPAN13O95857 204 aa18.9■□□□□ 0.62
COL13A1-203ENST00000398969 SYNJ2BPP57105 145 aa18.9■□□□□ 0.62
COL13A1-203ENST00000398969 RHOHQ15669 191 aa18.9■□□□□ 0.62
COL13A1-203ENST00000398969 TRPT1Q86TN4 253 aaKnown RBP18.9■□□□□ 0.62
COL13A1-203ENST00000398969 TMEM238C9JI98 176 aa18.89■□□□□ 0.61
COL13A1-203ENST00000398969 KMT2BQ9UMN6 2715 aaPredicted RBP18.89■□□□□ 0.61
COL13A1-203ENST00000398969 SPAG8Q99932 426 aaPredicted RBP18.89■□□□□ 0.61
COL13A1-203ENST00000398969 IGHV4-31P0DP07 118 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 AMELXQ99217 191 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 OPRPNQ99935 248 aaPredicted RBP18.88■□□□□ 0.61
COL13A1-203ENST00000398969 TSSC4Q9Y5U2 329 aaPredicted RBP18.88■□□□□ 0.61
COL13A1-203ENST00000398969 ZANQ9Y493 2812 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 APOMO95445 188 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 P0DMU3 169 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 FAM231AP0DMU4 169 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 FAM231CP0DMU5 169 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 NFE4Q86UQ8 179 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 SLC25A29Q8N8R3 303 aa18.88■□□□□ 0.61
COL13A1-203ENST00000398969 CR1P17927 2039 aa18.87■□□□□ 0.61
COL13A1-203ENST00000398969 IGHV3-30P01768 117 aa18.87■□□□□ 0.61
COL13A1-203ENST00000398969 IGHV3-30-5P0DP03 117 aa18.87■□□□□ 0.61
COL13A1-203ENST00000398969 NDUFA11Q86Y39 141 aa18.87■□□□□ 0.61
COL13A1-203ENST00000398969 DLX4Q92988 240 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-203ENST00000398969 J3QQQ9 107 aa18.86■□□□□ 0.61
COL13A1-203ENST00000398969 DOPEY2Q9Y3R5 2298 aa18.86■□□□□ 0.61
COL13A1-203ENST00000398969 TENM4Q6N022 2769 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 DUX5Q96PT3 197 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 APCP25054 2843 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 GAGE12HA6NDE8 117 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 UBE2D3P61077 147 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 UBE2D2P62837 147 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 C20orf203Q8NBC4 194 aa18.85■□□□□ 0.61
COL13A1-203ENST00000398969 LOC107984156A0A0G2JMH3 177 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 PLA2G2AP14555 144 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 CFAP126Q5VTH2 177 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 SFTA2Q6UW10 78 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 ARL17AQ8IVW1 177 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 Q96MF0 132 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 LGALS3P17931 250 aaKnown RBP18.84■□□□□ 0.61
COL13A1-203ENST00000398969 RNF152Q8N8N0 203 aa18.84■□□□□ 0.61
COL13A1-203ENST00000398969 NBPF19A0A087WUL8 3843 aa18.83■□□□□ 0.61
COL13A1-203ENST00000398969 I3L3M4 83 aa18.83■□□□□ 0.61
COL13A1-203ENST00000398969 TRGV11A0A075B6L2 103 aa18.83■□□□□ 0.6
COL13A1-203ENST00000398969 HOXD3P31249 432 aaPredicted RBP18.83■□□□□ 0.6
COL13A1-203ENST00000398969 INSL3P51460 131 aa18.83■□□□□ 0.6
COL13A1-203ENST00000398969 KRTAP1-3Q8IUG1 177 aa18.83■□□□□ 0.6
COL13A1-203ENST00000398969 GTSF1LQ9H1H1 148 aa18.83■□□□□ 0.6
COL13A1-203ENST00000398969 TMEM223A0PJW6 202 aa18.82■□□□□ 0.6
COL13A1-203ENST00000398969 PSMB2P49721 201 aa18.82■□□□□ 0.6
COL13A1-203ENST00000398969 SMCPP49901 116 aaPredicted RBP18.82■□□□□ 0.6
COL13A1-203ENST00000398969 SIGMAR1Q99720 223 aa18.82■□□□□ 0.6
COL13A1-203ENST00000398969 CFC1BP0CG36 223 aa18.81■□□□□ 0.6
COL13A1-203ENST00000398969 CFC1P0CG37 223 aa18.81■□□□□ 0.6
COL13A1-203ENST00000398969 SPATA25Q9BR10 227 aa18.81■□□□□ 0.6
COL13A1-203ENST00000398969 J3QKU1 62 aa18.81■□□□□ 0.6
COL13A1-203ENST00000398969 FSHBP01225 129 aa18.81■□□□□ 0.6
COL13A1-203ENST00000398969 AZU1P20160 251 aa18.81■□□□□ 0.6
COL13A1-203ENST00000398969 LEPROTO15243 131 aa18.8■□□□□ 0.6
COL13A1-203ENST00000398969 ELANEP08246 267 aa18.8■□□□□ 0.6
COL13A1-203ENST00000398969 RBMY1A1P0DJD3 496 aaKnown RBP18.8■□□□□ 0.6
COL13A1-203ENST00000398969 RBMY1CP0DJD4 496 aa18.8■□□□□ 0.6
COL13A1-203ENST00000398969 RBMY1FQ15415 496 aaKnown RBP18.8■□□□□ 0.6
COL13A1-203ENST00000398969 CREBBPQ92793 2442 aa18.79■□□□□ 0.6
COL13A1-203ENST00000398969 HIST2H2BCQ6DN03 193 aa18.79■□□□□ 0.6
COL13A1-203ENST00000398969 VPREB3Q9UKI3 123 aa18.79■□□□□ 0.6
COL13A1-203ENST00000398969 UBE2E2Q96LR5 201 aa18.79■□□□□ 0.6
COL13A1-203ENST00000398969 IGLV4-3A0A075B6K6 122 aa18.78■□□□□ 0.6
COL13A1-203ENST00000398969 ZNF22P17026 224 aaPredicted RBP18.78■□□□□ 0.6
COL13A1-203ENST00000398969 LYRM7Q5U5X0 104 aa18.78■□□□□ 0.6
COL13A1-203ENST00000398969 PRRC2AP48634 2157 aaKnown RBP18.78■□□□□ 0.6
COL13A1-203ENST00000398969 C1QTNF4Q9BXJ3 329 aa18.77■□□□□ 0.6
COL13A1-203ENST00000398969 ZNF702PQ9H963 129 aa18.77■□□□□ 0.6
COL13A1-203ENST00000398969 RHODO00212 210 aa18.77■□□□□ 0.6
COL13A1-203ENST00000398969 C10orf126Q8N4M7 172 aa18.77■□□□□ 0.6
COL13A1-203ENST00000398969 TCTEX1D4Q5JR98 221 aa18.76■□□□□ 0.59
COL13A1-203ENST00000398969 ATP6V0E2Q8NHE4 81 aa18.76■□□□□ 0.59
COL13A1-203ENST00000398969 A0A0J9YXV3 536 aa18.76■□□□□ 0.59
COL13A1-203ENST00000398969 VCX2Q9H322 139 aa18.76■□□□□ 0.59
COL13A1-203ENST00000398969 KNCNA6PVL3 124 aa18.75■□□□□ 0.59
COL13A1-203ENST00000398969 SMAGPQ0VAQ4 97 aa18.75■□□□□ 0.59
COL13A1-203ENST00000398969 FOXI1Q12951 378 aa18.75■□□□□ 0.59
COL13A1-203ENST00000398969 EDA2RQ9HAV5 297 aa18.75■□□□□ 0.59
COL13A1-203ENST00000398969 IGHV3-64A0A075B6Q5 118 aa18.74■□□□□ 0.59
COL13A1-203ENST00000398969 SCGB1A1P11684 91 aa18.74■□□□□ 0.59
COL13A1-203ENST00000398969 PRO1854Q9UHT4 67 aa18.74■□□□□ 0.59
COL13A1-203ENST00000398969 TCL1BO95988 128 aa18.74■□□□□ 0.59
COL13A1-203ENST00000398969 ZNF418Q8TF45 676 aaPredicted RBP18.74■□□□□ 0.59
COL13A1-203ENST00000398969 IGHV3-73A0A0B4J1V6 119 aa18.73■□□□□ 0.59
COL13A1-203ENST00000398969 HTN1P15515 57 aa18.73■□□□□ 0.59
COL13A1-203ENST00000398969 Q6YL49 198 aa18.73■□□□□ 0.59
COL13A1-203ENST00000398969 TEX15Q9BXT5 2789 aa18.72■□□□□ 0.59
COL13A1-203ENST00000398969 PROK1P58294 105 aa18.72■□□□□ 0.59
COL13A1-203ENST00000398969 TRBV20-1A0A075B6N2 111 aa18.71■□□□□ 0.59
COL13A1-203ENST00000398969 A4D1N5 150 aa18.71■□□□□ 0.59
COL13A1-203ENST00000398969 DEFB131AP59861 70 aa18.71■□□□□ 0.59
COL13A1-203ENST00000398969 FAM104AQ969W3 186 aa18.71■□□□□ 0.59
COL13A1-203ENST00000398969 PYGO1Q9Y3Y4 419 aa18.71■□□□□ 0.59
COL13A1-203ENST00000398969 ZNF469Q96JG9 3925 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms