RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 C11orf72Q8NBR9 251 aa18.78■□□□□ 0.6
SHARPIN-202ENST00000398712 TMEM208Q9BTX3 173 aa18.78■□□□□ 0.6
SHARPIN-202ENST00000398712 PRM2P04554 102 aa18.77■□□□□ 0.6
SHARPIN-202ENST00000398712 MRPL35Q9NZE8 188 aaKnown RBP18.77■□□□□ 0.6
SHARPIN-202ENST00000398712 HHLA3Q9XRX5 114 aa18.77■□□□□ 0.6
SHARPIN-202ENST00000398712 F8P00451 2351 aa18.77■□□□□ 0.6
SHARPIN-202ENST00000398712 FOSL1P15407 271 aa18.76■□□□□ 0.59
SHARPIN-202ENST00000398712 PLNP26678 52 aa18.76■□□□□ 0.59
SHARPIN-202ENST00000398712 KRTAP10-3P60369 221 aa18.76■□□□□ 0.59
SHARPIN-202ENST00000398712 FGF6P10767 208 aa18.76■□□□□ 0.59
SHARPIN-202ENST00000398712 BEAN1Q3B7T3 259 aa18.76■□□□□ 0.59
SHARPIN-202ENST00000398712 RIPPLY3P57055 190 aa18.75■□□□□ 0.59
SHARPIN-202ENST00000398712 BOD1L2Q8IYS8 172 aa18.75■□□□□ 0.59
SHARPIN-202ENST00000398712 NEXN-AS1Q8NBZ9 246 aa18.75■□□□□ 0.59
SHARPIN-202ENST00000398712 F8VRH5 84 aa18.74■□□□□ 0.59
SHARPIN-202ENST00000398712 DLEU1O43261 78 aa18.74■□□□□ 0.59
SHARPIN-202ENST00000398712 PF4P02776 101 aa18.74■□□□□ 0.59
SHARPIN-202ENST00000398712 TP53TG1Q9Y2A0 90 aa18.74■□□□□ 0.59
SHARPIN-202ENST00000398712 NMUP48645 174 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 RHOHQ15669 191 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 UFSP1Q6NVU6 142 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 C1orf158Q8N1D5 194 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 RHODO00212 210 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 C12orf54Q6X4T0 127 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 BAALCQ8WXS3 180 aa18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 CHTOPQ9Y3Y2 248 aaKnown RBP18.73■□□□□ 0.59
SHARPIN-202ENST00000398712 I3L3M4 83 aa18.71■□□□□ 0.59
SHARPIN-202ENST00000398712 TCTAP57738 103 aa18.71■□□□□ 0.59
SHARPIN-202ENST00000398712 ZC2HC1BQ5TFG8 222 aa18.71■□□□□ 0.59
SHARPIN-202ENST00000398712 C2orf91Q6ZV80 131 aa18.71■□□□□ 0.59
SHARPIN-202ENST00000398712 TMEM141Q96I45 108 aa18.71■□□□□ 0.59
SHARPIN-202ENST00000398712 MPV17L2Q567V2 206 aa18.7■□□□□ 0.58
SHARPIN-202ENST00000398712 CFAP126Q5VTH2 177 aa18.7■□□□□ 0.58
SHARPIN-202ENST00000398712 IGHV3OR16-12A0A075B7B8 117 aa18.7■□□□□ 0.58
SHARPIN-202ENST00000398712 IGHV3-73A0A0B4J1V6 119 aa18.7■□□□□ 0.58
SHARPIN-202ENST00000398712 SIVA1O15304 175 aa18.69■□□□□ 0.58
SHARPIN-202ENST00000398712 TIMM17AQ99595 171 aa18.69■□□□□ 0.58
SHARPIN-202ENST00000398712 C19orf73Q9NVV2 129 aa18.69■□□□□ 0.58
SHARPIN-202ENST00000398712 MRPL16Q9NX20 251 aaKnown RBP18.69■□□□□ 0.58
SHARPIN-202ENST00000398712 IGIPA6NJ69 53 aa18.68■□□□□ 0.58
SHARPIN-202ENST00000398712 LINC00482Q8N8I6 264 aa18.68■□□□□ 0.58
SHARPIN-202ENST00000398712 TEP1Q99973 2627 aaKnown RBP18.68■□□□□ 0.58
SHARPIN-202ENST00000398712 AZU1P20160 251 aa18.68■□□□□ 0.58
SHARPIN-202ENST00000398712 GTSCR1Q86UQ5 136 aa18.68■□□□□ 0.58
SHARPIN-202ENST00000398712 RS1O15537 224 aa18.67■□□□□ 0.58
SHARPIN-202ENST00000398712 TSHBP01222 138 aa18.67■□□□□ 0.58
SHARPIN-202ENST00000398712 IL17DQ8TAD2 202 aa18.67■□□□□ 0.58
SHARPIN-202ENST00000398712 PRSS29PA6NIE9 313 aa18.66■□□□□ 0.58
SHARPIN-202ENST00000398712 RPL39P62891 51 aaKnown RBP18.66■□□□□ 0.58
SHARPIN-202ENST00000398712 BVES-AS1Q5T3Y7 98 aa18.66■□□□□ 0.58
SHARPIN-202ENST00000398712 PCP2Q8IVA1 136 aa18.66■□□□□ 0.58
SHARPIN-202ENST00000398712 DEFB104AQ8WTQ1 72 aa18.66■□□□□ 0.58
SHARPIN-202ENST00000398712 TNFRSF18Q9Y5U5 241 aa18.66■□□□□ 0.58
SHARPIN-202ENST00000398712 C1QTNF4Q9BXJ3 329 aa18.65■□□□□ 0.58
SHARPIN-202ENST00000398712 IGKV2D-26A0A0A0MRZ7 120 aa18.65■□□□□ 0.58
SHARPIN-202ENST00000398712 CRLF1O75462 422 aa18.65■□□□□ 0.58
SHARPIN-202ENST00000398712 RNASE8Q8TDE3 154 aaKnown RBP18.65■□□□□ 0.58
SHARPIN-202ENST00000398712 TMEM263Q8WUH6 116 aaKnown RBP18.65■□□□□ 0.58
SHARPIN-202ENST00000398712 WFDC10AQ9H1F0 79 aa18.65■□□□□ 0.58
SHARPIN-202ENST00000398712 NACAE9PAV3 2078 aa18.64■□□□□ 0.58
SHARPIN-202ENST00000398712 SETD2Q9BYW2 2564 aaPredicted RBP18.63■□□□□ 0.57
SHARPIN-202ENST00000398712 PMVKQ15126 192 aa18.63■□□□□ 0.57
SHARPIN-202ENST00000398712 TMEM97Q5BJF2 176 aa18.63■□□□□ 0.57
SHARPIN-202ENST00000398712 IGHV3-53P01767 116 aa18.63■□□□□ 0.57
SHARPIN-202ENST00000398712 GIG44P09565 113 aaPredicted RBP18.63■□□□□ 0.57
SHARPIN-202ENST00000398712 P0DMU3 169 aa18.62■□□□□ 0.57
SHARPIN-202ENST00000398712 FAM231AP0DMU4 169 aa18.62■□□□□ 0.57
SHARPIN-202ENST00000398712 FAM231CP0DMU5 169 aa18.62■□□□□ 0.57
SHARPIN-202ENST00000398712 RPL35AP18077 110 aaKnown RBP18.62■□□□□ 0.57
SHARPIN-202ENST00000398712 C20orf203Q8NBC4 194 aa18.62■□□□□ 0.57
SHARPIN-202ENST00000398712 DNAJC30Q96LL9 226 aa18.62■□□□□ 0.57
SHARPIN-202ENST00000398712 PAPPA-AS1Q5QFB9 102 aa18.61■□□□□ 0.57
SHARPIN-202ENST00000398712 Q6ZSN1 163 aa18.6■□□□□ 0.57
SHARPIN-202ENST00000398712 TRGV1A0A0A0MS02 117 aa18.6■□□□□ 0.57
SHARPIN-202ENST00000398712 INSL3P51460 131 aa18.59■□□□□ 0.57
SHARPIN-202ENST00000398712 CST9LQ9H4G1 147 aa18.59■□□□□ 0.57
SHARPIN-202ENST00000398712 HSD52Q0P140 79 aa18.58■□□□□ 0.57
SHARPIN-202ENST00000398712 OR4C5Q8NGB2 326 aa18.58■□□□□ 0.57
SHARPIN-202ENST00000398712 C16orf74Q96GX8 76 aa18.58■□□□□ 0.57
SHARPIN-202ENST00000398712 ZMAT5Q9UDW3 170 aaKnown RBP18.58■□□□□ 0.57
SHARPIN-202ENST00000398712 ZNF25P17030 456 aaPredicted RBP18.58■□□□□ 0.56
SHARPIN-202ENST00000398712 HIGD1BQ9P298 99 aa18.58■□□□□ 0.56
SHARPIN-202ENST00000398712 DAZ2Q13117 558 aaKnown RBP18.55■□□□□ 0.56
SHARPIN-202ENST00000398712 LINC00469Q8N7U9 141 aa18.55■□□□□ 0.56
SHARPIN-202ENST00000398712 SEC11AP67812 179 aa18.55■□□□□ 0.56
SHARPIN-202ENST00000398712 C9orf66Q5T8R8 295 aa18.55■□□□□ 0.56
SHARPIN-202ENST00000398712 CSNK1G2-AS1Q8NCQ2 148 aa18.55■□□□□ 0.56
SHARPIN-202ENST00000398712 IGLV4-69A0A075B6H9 119 aa18.54■□□□□ 0.56
SHARPIN-202ENST00000398712 TTTY13Q9BZ97 58 aa18.54■□□□□ 0.56
SHARPIN-202ENST00000398712 NSD1Q96L73 2696 aaPredicted RBP18.54■□□□□ 0.56
SHARPIN-202ENST00000398712 TRAV8-6A0A0B4J262 113 aa18.53■□□□□ 0.56
SHARPIN-202ENST00000398712 TRAV4A0A0B4J268 109 aa18.53■□□□□ 0.56
SHARPIN-202ENST00000398712 OR11H2Q8NH07 326 aa18.53■□□□□ 0.56
SHARPIN-202ENST00000398712 Q6ZTI0 123 aa18.53■□□□□ 0.56
SHARPIN-202ENST00000398712 COX11Q9Y6N1 276 aa18.53■□□□□ 0.56
SHARPIN-202ENST00000398712 E9PLD3 99 aa18.52■□□□□ 0.55
SHARPIN-202ENST00000398712 NOP10Q9NPE3 64 aaKnown RBP18.52■□□□□ 0.55
SHARPIN-202ENST00000398712 PYGO1Q9Y3Y4 419 aa18.52■□□□□ 0.55
SHARPIN-202ENST00000398712 TRBV25-1A0A075B6N4 114 aa18.51■□□□□ 0.55
SHARPIN-202ENST00000398712 C11orf86A6NJI1 115 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms