RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 CDIP1Q9H305 208 aa16.26■□□□□ 0.19
NFIX-203ENST00000397661 PRORYQ9H606 182 aa16.26■□□□□ 0.19
NFIX-203ENST00000397661 KNCNA6PVL3 124 aa16.26■□□□□ 0.19
NFIX-203ENST00000397661 LINC00315P59091 139 aa16.26■□□□□ 0.19
NFIX-203ENST00000397661 BEX4Q9NWD9 120 aaPredicted RBP16.25■□□□□ 0.19
NFIX-203ENST00000397661 IGLV1-40P01703 118 aa16.25■□□□□ 0.19
NFIX-203ENST00000397661 RAX2Q96IS3 184 aa16.25■□□□□ 0.19
NFIX-203ENST00000397661 PRB1P04280 392 aa16.24■□□□□ 0.19
NFIX-203ENST00000397661 XGP55808 180 aa16.24■□□□□ 0.19
NFIX-203ENST00000397661 KHDC1LQ5JSQ8 128 aa16.24■□□□□ 0.19
NFIX-203ENST00000397661 ADARB2-AS1A8MUL3 147 aa16.24■□□□□ 0.19
NFIX-203ENST00000397661 RNASE13Q5GAN3 156 aaKnown RBP16.24■□□□□ 0.19
NFIX-203ENST00000397661 P0DMU3 169 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 FAM231AP0DMU4 169 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 FAM231CP0DMU5 169 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 CRYBA4P53673 196 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 FAM19A4Q96LR4 140 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 TMEM238LA0A1B0GVL6 79 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 A6NJY4 79 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 TCL1BO95988 128 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 NPC2P61916 151 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 KIF25-AS1Q9Y6Z4 181 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 B4DSR2 109 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 CRIP2P52943 208 aaPredicted RBP16.23■□□□□ 0.19
NFIX-203ENST00000397661 C18orf65Q6ZTR6 163 aa16.23■□□□□ 0.19
NFIX-203ENST00000397661 KLLNB2CW77 178 aa16.22■□□□□ 0.19
NFIX-203ENST00000397661 PROK1P58294 105 aa16.22■□□□□ 0.19
NFIX-203ENST00000397661 MTORP42345 2549 aa16.22■□□□□ 0.19
NFIX-203ENST00000397661 ZNF876PQ49A33 203 aa16.22■□□□□ 0.19
NFIX-203ENST00000397661 CARD19Q96LW7 228 aa16.22■□□□□ 0.19
NFIX-203ENST00000397661 TSPEAR-AS2P59090 65 aa16.21■□□□□ 0.18
NFIX-203ENST00000397661 ACANP16112 2415 aa16.2■□□□□ 0.18
NFIX-203ENST00000397661 SNRPD3P62318 126 aaKnown RBP16.2■□□□□ 0.18
NFIX-203ENST00000397661 IGHV4OR15-8A0A075B7B6 117 aa16.2■□□□□ 0.18
NFIX-203ENST00000397661 A0A087WW49 117 aa16.2■□□□□ 0.18
NFIX-203ENST00000397661 VCYO14598 125 aa16.2■□□□□ 0.18
NFIX-203ENST00000397661 NDUFA11Q86Y39 141 aa16.2■□□□□ 0.18
NFIX-203ENST00000397661 CEMP1Q6PRD7 247 aaPredicted RBP16.19■□□□□ 0.18
NFIX-203ENST00000397661 ZNRF2Q8NHG8 242 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 IGLV4-69A0A075B6H9 119 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 COX6B1P14854 86 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 UBE2D1P51668 147 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 PSMB8P28062 276 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 Q9UF83 564 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 ZNF580Q9UK33 172 aa16.19■□□□□ 0.18
NFIX-203ENST00000397661 A0A0J9YY99 117 aa16.18■□□□□ 0.18
NFIX-203ENST00000397661 GATA3P23771 443 aa16.18■□□□□ 0.18
NFIX-203ENST00000397661 Q6ZUT4 128 aa16.18■□□□□ 0.18
NFIX-203ENST00000397661 POLR2KP53803 58 aaKnown RBP16.18■□□□□ 0.18
NFIX-203ENST00000397661 PMVKQ15126 192 aa16.18■□□□□ 0.18
NFIX-203ENST00000397661 IGHV3-16A0A0C4DH30 117 aa16.17■□□□□ 0.18
NFIX-203ENST00000397661 CFC1BP0CG36 223 aa16.17■□□□□ 0.18
NFIX-203ENST00000397661 CFC1P0CG37 223 aa16.17■□□□□ 0.18
NFIX-203ENST00000397661 IGIPA6NJ69 53 aa16.17■□□□□ 0.18
NFIX-203ENST00000397661 C11orf44Q8N8P7 122 aa16.17■□□□□ 0.18
NFIX-203ENST00000397661 H3BUA1 57 aa16.17■□□□□ 0.18
NFIX-203ENST00000397661 A0A0J9YX75 114 aa16.16■□□□□ 0.18
NFIX-203ENST00000397661 SLURP1P55000 103 aa16.16■□□□□ 0.18
NFIX-203ENST00000397661 TRPT1Q86TN4 253 aaKnown RBP16.15■□□□□ 0.18
NFIX-203ENST00000397661 HOXD3P31249 432 aaPredicted RBP16.15■□□□□ 0.18
NFIX-203ENST00000397661 CFHR3Q02985 330 aa16.15■□□□□ 0.18
NFIX-203ENST00000397661 PPP1R17O96001 155 aa16.14■□□□□ 0.18
NFIX-203ENST00000397661 ANKRD29Q8N6D5 301 aa16.14■□□□□ 0.18
NFIX-203ENST00000397661 FN1P02751 2386 aaKnown RBP16.14■□□□□ 0.17
NFIX-203ENST00000397661 IGHV1OR15-1A0A075B7D0 117 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 HERVK_113P61574 105 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 TCTEX1D4Q5JR98 221 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 DEFB131AP59861 70 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 UBE2D3P61077 147 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 UBE2D2P62837 147 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 RNF183Q96D59 192 aa16.14■□□□□ 0.17
NFIX-203ENST00000397661 A8MWV9 139 aa16.13■□□□□ 0.17
NFIX-203ENST00000397661 TEN1Q86WV5 123 aa16.13■□□□□ 0.17
NFIX-203ENST00000397661 APRG1Q8IVJ8 170 aa16.13■□□□□ 0.17
NFIX-203ENST00000397661 PPDPFLQ8WWR9 84 aa16.13■□□□□ 0.17
NFIX-203ENST00000397661 TRAV2A0A0B4J234 112 aa16.12■□□□□ 0.17
NFIX-203ENST00000397661 A0A0J9YXV3 536 aa16.12■□□□□ 0.17
NFIX-203ENST00000397661 LINC01619G3V211 115 aa16.12■□□□□ 0.17
NFIX-203ENST00000397661 M0QY20 66 aa16.12■□□□□ 0.17
NFIX-203ENST00000397661 C9JAW5 83 aa16.12■□□□□ 0.17
NFIX-203ENST00000397661 MED14OSP0DP75 135 aa16.12■□□□□ 0.17
NFIX-203ENST00000397661 LGALS3P17931 250 aaKnown RBP16.11■□□□□ 0.17
NFIX-203ENST00000397661 SPXQ9BT56 116 aa16.11■□□□□ 0.17
NFIX-203ENST00000397661 ZNF469Q96JG9 3925 aaPredicted RBP16.11■□□□□ 0.17
NFIX-203ENST00000397661 IGHV3-38A0A0C4DH36 116 aa16.11■□□□□ 0.17
NFIX-203ENST00000397661 IGHV3-30P01768 117 aa16.11■□□□□ 0.17
NFIX-203ENST00000397661 RBMY1A1P0DJD3 496 aaKnown RBP16.11■□□□□ 0.17
NFIX-203ENST00000397661 RBMY1CP0DJD4 496 aa16.11■□□□□ 0.17
NFIX-203ENST00000397661 IGHV3-30-5P0DP03 117 aa16.11■□□□□ 0.17
NFIX-203ENST00000397661 RBMY1FQ15415 496 aaKnown RBP16.11■□□□□ 0.17
NFIX-203ENST00000397661 K7EMT4 169 aa16.1■□□□□ 0.17
NFIX-203ENST00000397661 K7EQG2 157 aa16.1■□□□□ 0.17
NFIX-203ENST00000397661 IGHV3OR16-12A0A075B7B8 117 aa16.1■□□□□ 0.17
NFIX-203ENST00000397661 A4D1N5 150 aa16.1■□□□□ 0.17
NFIX-203ENST00000397661 Q1RN00 199 aa16.1■□□□□ 0.17
NFIX-203ENST00000397661 USP24Q9UPU5 2620 aa16.1■□□□□ 0.17
NFIX-203ENST00000397661 C10orf126Q8N4M7 172 aa16.09■□□□□ 0.17
NFIX-203ENST00000397661 PRO1854Q9UHT4 67 aa16.09■□□□□ 0.17
NFIX-203ENST00000397661 A0A0U1RRA0 63 aa16.09■□□□□ 0.17
NFIX-203ENST00000397661 J3QQQ9 107 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms