RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 DLEU1O43261 78 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 ERASQ7Z444 233 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 BOD1L2Q8IYS8 172 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 EDA2RQ9HAV5 297 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 HHLA3Q9XRX5 114 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 ANK3Q12955 4377 aaKnown RBP10.91□□□□□ -0.66
CBX3-202ENST00000396386 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 MPV17L2Q567V2 206 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 C12orf54Q6X4T0 127 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 SPXQ9BT56 116 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 XCL2Q9UBD3 114 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 TP53TG1Q9Y2A0 90 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 NDUFA11Q86Y39 141 aa10.9□□□□□ -0.66
CBX3-202ENST00000396386 BAALCQ8WXS3 180 aa10.9□□□□□ -0.66
CBX3-202ENST00000396386 TMEM208Q9BTX3 173 aa10.9□□□□□ -0.66
CBX3-202ENST00000396386 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
CBX3-202ENST00000396386 PRM2P04554 102 aa10.89□□□□□ -0.67
CBX3-202ENST00000396386 RHOHQ15669 191 aa10.89□□□□□ -0.67
CBX3-202ENST00000396386 ZC2HC1BQ5TFG8 222 aa10.89□□□□□ -0.67
CBX3-202ENST00000396386 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.67
CBX3-202ENST00000396386 BVES-AS1Q5T3Y7 98 aa10.89□□□□□ -0.67
CBX3-202ENST00000396386 FAM110AQ9BQ89 295 aa10.89□□□□□ -0.67
CBX3-202ENST00000396386 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
CBX3-202ENST00000396386 RHODO00212 210 aa10.88□□□□□ -0.67
CBX3-202ENST00000396386 UFSP1Q6NVU6 142 aa10.88□□□□□ -0.67
CBX3-202ENST00000396386 GTSCR1Q86UQ5 136 aa10.88□□□□□ -0.67
CBX3-202ENST00000396386 PCP2Q8IVA1 136 aa10.88□□□□□ -0.67
CBX3-202ENST00000396386 LINC00469Q8N7U9 141 aa10.88□□□□□ -0.67
CBX3-202ENST00000396386 ZMAT5Q9UDW3 170 aaKnown RBP10.88□□□□□ -0.67
CBX3-202ENST00000396386 SIVA1O15304 175 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 C1orf158Q8N1D5 194 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 TMEM141Q96I45 108 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 MRPL16Q9NX20 251 aaKnown RBP10.87□□□□□ -0.67
CBX3-202ENST00000396386 NACAE9PAV3 2078 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 IGKV2D-26A0A0A0MRZ7 120 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 I3L3M4 83 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 KRTAP10-3P60369 221 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 BEAN1Q3B7T3 259 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 TIMM17AQ99595 171 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
CBX3-202ENST00000396386 WNK1Q9H4A3 2382 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 TSHBP01222 138 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 PF4P02776 101 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
CBX3-202ENST00000396386 TMEM97Q5BJF2 176 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
CBX3-202ENST00000396386 IGHV3OR16-12A0A075B7B8 117 aa10.85□□□□□ -0.67
CBX3-202ENST00000396386 ZNF25P17030 456 aaPredicted RBP10.85□□□□□ -0.67
CBX3-202ENST00000396386 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
CBX3-202ENST00000396386 PRSS29PA6NIE9 313 aa10.85□□□□□ -0.67
CBX3-202ENST00000396386 RS1O15537 224 aa10.85□□□□□ -0.67
CBX3-202ENST00000396386 CUBNO60494 3623 aa10.84□□□□□ -0.67
CBX3-202ENST00000396386 AZU1P20160 251 aa10.84□□□□□ -0.67
CBX3-202ENST00000396386 HSD52Q0P140 79 aa10.84□□□□□ -0.67
CBX3-202ENST00000396386 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
CBX3-202ENST00000396386 C19orf73Q9NVV2 129 aa10.84□□□□□ -0.67
CBX3-202ENST00000396386 P0DMU3 169 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 PMVKQ15126 192 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 DNHD1Q96M86 4753 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 C20orf203Q8NBC4 194 aa10.83□□□□□ -0.68
CBX3-202ENST00000396386 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
CBX3-202ENST00000396386 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
CBX3-202ENST00000396386 FOSL1P15407 271 aa10.82□□□□□ -0.68
CBX3-202ENST00000396386 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
CBX3-202ENST00000396386 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
CBX3-202ENST00000396386 IGHV3-53P01767 116 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 SEC11AP67812 179 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 C1QTNF4Q9BXJ3 329 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 COX11Q9Y6N1 276 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 TRGV1A0A0A0MS02 117 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 RPL35AP18077 110 aaKnown RBP10.81□□□□□ -0.68
CBX3-202ENST00000396386 KRTAP21-3Q3LHN1 58 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 Q6ZSN1 163 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 DNAJC30Q96LL9 226 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 TTTY13Q9BZ97 58 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 CST9LQ9H4G1 147 aa10.81□□□□□ -0.68
CBX3-202ENST00000396386 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
CBX3-202ENST00000396386 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
CBX3-202ENST00000396386 GAGE1Q13065 139 aa10.8□□□□□ -0.68
CBX3-202ENST00000396386 OR11H2Q8NH07 326 aa10.8□□□□□ -0.68
CBX3-202ENST00000396386 ORAOV1Q8WV07 137 aa10.8□□□□□ -0.68
CBX3-202ENST00000396386 TRAV8-6A0A0B4J262 113 aa10.79□□□□□ -0.68
CBX3-202ENST00000396386 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
CBX3-202ENST00000396386 TRBV25-1A0A075B6N4 114 aa10.78□□□□□ -0.68
CBX3-202ENST00000396386 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
CBX3-202ENST00000396386 OR4C5Q8NGB2 326 aa10.78□□□□□ -0.68
CBX3-202ENST00000396386 C16orf74Q96GX8 76 aa10.78□□□□□ -0.68
CBX3-202ENST00000396386 NSD1Q96L73 2696 aaPredicted RBP10.78□□□□□ -0.68
CBX3-202ENST00000396386 E9PLD3 99 aa10.78□□□□□ -0.68
CBX3-202ENST00000396386 TAX1BP3O14907 124 aa10.78□□□□□ -0.68
CBX3-202ENST00000396386 Q6ZVH6 145 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms