RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LRP2P98164 4655 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 A6NHS1 94 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 CLRN3Q8NCR9 226 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 DPH3Q96FX2 82 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 DERL1Q9BUN8 251 aa13.47□□□□□ -0.25
TRAF4-203ENST00000394925 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 AKR1C3P42330 323 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 SSTP61278 116 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 MED28Q9H204 178 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 VAX2Q9UIW0 290 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 TNXBP22105 4242 aa13.46□□□□□ -0.25
TRAF4-203ENST00000394925 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
TRAF4-203ENST00000394925 hDV102S1A0JD36 115 aa13.45□□□□□ -0.26
TRAF4-203ENST00000394925 CIRBPQ14011 172 aaKnown RBP13.45□□□□□ -0.26
TRAF4-203ENST00000394925 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
TRAF4-203ENST00000394925 TRBV25-1A0A075B6N4 114 aa13.44□□□□□ -0.26
TRAF4-203ENST00000394925 FHITP49789 147 aa13.44□□□□□ -0.26
TRAF4-203ENST00000394925 CNBPP62633 177 aaKnown RBP13.44□□□□□ -0.26
TRAF4-203ENST00000394925 SPANXN1Q5VSR9 72 aa13.44□□□□□ -0.26
TRAF4-203ENST00000394925 STOML3Q8TAV4 291 aa13.44□□□□□ -0.26
TRAF4-203ENST00000394925 TCEAL7Q9BRU2 100 aa13.44□□□□□ -0.26
TRAF4-203ENST00000394925 REG3AQ06141 175 aa13.43□□□□□ -0.26
TRAF4-203ENST00000394925 IGHV3-64A0A075B6Q5 118 aa13.42□□□□□ -0.26
TRAF4-203ENST00000394925 A0A087WYN8 130 aa13.42□□□□□ -0.26
TRAF4-203ENST00000394925 FXYD6-FXYD2A0A087WZ82 144 aa13.42□□□□□ -0.26
TRAF4-203ENST00000394925 SNAI2O43623 268 aa13.42□□□□□ -0.26
TRAF4-203ENST00000394925 CXCL1P09341 107 aa13.42□□□□□ -0.26
TRAF4-203ENST00000394925 CHTF8P0CG12 524 aa13.42□□□□□ -0.26
TRAF4-203ENST00000394925 SSBP4Q9BWG4 385 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-203ENST00000394925 IQCJQ1A5X6 159 aa13.41□□□□□ -0.26
TRAF4-203ENST00000394925 IGHV1-24A0A0C4DH33 117 aa13.4□□□□□ -0.26
TRAF4-203ENST00000394925 OR5AL1P0C617 328 aa13.4□□□□□ -0.26
TRAF4-203ENST00000394925 SMIM17P0DL12 118 aa13.4□□□□□ -0.26
TRAF4-203ENST00000394925 RNF185Q96GF1 192 aa13.4□□□□□ -0.26
TRAF4-203ENST00000394925 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
TRAF4-203ENST00000394925 KIF25-AS1Q9Y6Z4 181 aa13.4□□□□□ -0.26
TRAF4-203ENST00000394925 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-203ENST00000394925 PAGE4O60829 102 aa13.39□□□□□ -0.27
TRAF4-203ENST00000394925 SLPIP03973 132 aa13.39□□□□□ -0.27
TRAF4-203ENST00000394925 GIPP09681 153 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-203ENST00000394925 RAB5CP51148 216 aa13.39□□□□□ -0.27
TRAF4-203ENST00000394925 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
TRAF4-203ENST00000394925 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
TRAF4-203ENST00000394925 TRAV8-4A0A0B4J246 113 aa13.38□□□□□ -0.27
TRAF4-203ENST00000394925 P01737 135 aa13.38□□□□□ -0.27
TRAF4-203ENST00000394925 SPACA4Q8TDM5 124 aa13.38□□□□□ -0.27
TRAF4-203ENST00000394925 PHOX2AO14813 284 aa13.37□□□□□ -0.27
TRAF4-203ENST00000394925 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
TRAF4-203ENST00000394925 BAGE2Q86Y30 109 aa13.37□□□□□ -0.27
TRAF4-203ENST00000394925 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
TRAF4-203ENST00000394925 MLST8Q9BVC4 326 aa13.37□□□□□ -0.27
TRAF4-203ENST00000394925 IGLV4-60A0A075B6I1 120 aa13.36□□□□□ -0.27
TRAF4-203ENST00000394925 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
TRAF4-203ENST00000394925 GFRA4Q9GZZ7 299 aa13.36□□□□□ -0.27
TRAF4-203ENST00000394925 MGPP08493 103 aa13.35□□□□□ -0.27
TRAF4-203ENST00000394925 PLAC8Q9NZF1 115 aa13.35□□□□□ -0.27
TRAF4-203ENST00000394925 M0QY20 66 aa13.34□□□□□ -0.27
TRAF4-203ENST00000394925 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
TRAF4-203ENST00000394925 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
TRAF4-203ENST00000394925 A0A1B0GV50 99 aa13.33□□□□□ -0.28
TRAF4-203ENST00000394925 TMEM243Q9BU79 118 aa13.33□□□□□ -0.28
TRAF4-203ENST00000394925 CYTL1Q9NRR1 136 aa13.33□□□□□ -0.28
TRAF4-203ENST00000394925 H7C1H1 209 aa13.32□□□□□ -0.28
TRAF4-203ENST00000394925 GZMBP10144 247 aa13.32□□□□□ -0.28
TRAF4-203ENST00000394925 SUMO4Q6EEV6 95 aa13.32□□□□□ -0.28
TRAF4-203ENST00000394925 PFDN1O60925 122 aa13.31□□□□□ -0.28
TRAF4-203ENST00000394925 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-203ENST00000394925 ODF1Q14990 250 aa13.31□□□□□ -0.28
TRAF4-203ENST00000394925 SFT2D1Q8WV19 159 aa13.31□□□□□ -0.28
TRAF4-203ENST00000394925 TPPP3Q9BW30 176 aa13.31□□□□□ -0.28
TRAF4-203ENST00000394925 COX6A2Q02221 97 aa13.3□□□□□ -0.28
TRAF4-203ENST00000394925 GTSF1Q8WW33 167 aa13.3□□□□□ -0.28
TRAF4-203ENST00000394925 LINC01600Q96MT4 127 aa13.3□□□□□ -0.28
TRAF4-203ENST00000394925 ARPC5O15511 151 aa13.29□□□□□ -0.28
TRAF4-203ENST00000394925 SULT1A2P50226 295 aa13.29□□□□□ -0.28
TRAF4-203ENST00000394925 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
TRAF4-203ENST00000394925 TMUB2Q71RG4 321 aa13.29□□□□□ -0.28
TRAF4-203ENST00000394925 C15orf56Q8N910 161 aa13.29□□□□□ -0.28
TRAF4-203ENST00000394925 G3V3Q6 166 aa13.28□□□□□ -0.28
TRAF4-203ENST00000394925 UBE2L6O14933 153 aa13.28□□□□□ -0.28
TRAF4-203ENST00000394925 MAJINQ3KP22 176 aa13.28□□□□□ -0.28
TRAF4-203ENST00000394925 FAM213BQ8TBF2 198 aa13.28□□□□□ -0.28
TRAF4-203ENST00000394925 MBD3L1Q8WWY6 194 aa13.28□□□□□ -0.28
TRAF4-203ENST00000394925 IGKV2-24A0A0C4DH68 120 aa13.27□□□□□ -0.29
TRAF4-203ENST00000394925 GAGE12HA6NDE8 117 aa13.27□□□□□ -0.29
TRAF4-203ENST00000394925 RPS10P46783 165 aaKnown RBP13.27□□□□□ -0.29
TRAF4-203ENST00000394925 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
TRAF4-203ENST00000394925 RASL11AQ6T310 242 aa13.27□□□□□ -0.29
TRAF4-203ENST00000394925 FER1L6-AS1Q8NA97 138 aa13.27□□□□□ -0.29
TRAF4-203ENST00000394925 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.29
TRAF4-203ENST00000394925 IGLC6P0CF74 106 aa13.26□□□□□ -0.29
TRAF4-203ENST00000394925 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
TRAF4-203ENST00000394925 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
TRAF4-203ENST00000394925 IGKV3OR2-268A0A0C4DH90 116 aa13.25□□□□□ -0.29
TRAF4-203ENST00000394925 NDUFS6O75380 124 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms