RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 A6NDN8 102 aa11.22□□□□□ -0.61
CPSF7-202ENST00000394888 ZNF876PQ49A33 203 aa11.22□□□□□ -0.61
CPSF7-202ENST00000394888 MYMXA0A1B0GTQ4 84 aa11.22□□□□□ -0.61
CPSF7-202ENST00000394888 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
CPSF7-202ENST00000394888 TIMM17AQ99595 171 aa11.21□□□□□ -0.61
CPSF7-202ENST00000394888 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.61
CPSF7-202ENST00000394888 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.61
CPSF7-202ENST00000394888 PPP1R17O96001 155 aa11.21□□□□□ -0.62
CPSF7-202ENST00000394888 GCSHP23434 173 aa11.21□□□□□ -0.62
CPSF7-202ENST00000394888 Q6ZSV7 163 aa11.2□□□□□ -0.62
CPSF7-202ENST00000394888 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
CPSF7-202ENST00000394888 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
CPSF7-202ENST00000394888 EMP1P54849 157 aa11.2□□□□□ -0.62
CPSF7-202ENST00000394888 FHL3Q13643 280 aa11.2□□□□□ -0.62
CPSF7-202ENST00000394888 MAP6D1Q9H9H5 199 aa11.2□□□□□ -0.62
CPSF7-202ENST00000394888 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 VCYO14598 125 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-202ENST00000394888 TAL2Q16559 108 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 OCIAD2Q56VL3 154 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 DEFB131AP59861 70 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 CYSLTR1Q9Y271 337 aa11.19□□□□□ -0.62
CPSF7-202ENST00000394888 MYO9AB2RTY4 2548 aa11.18□□□□□ -0.62
CPSF7-202ENST00000394888 SAP30O75446 220 aa11.18□□□□□ -0.62
CPSF7-202ENST00000394888 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
CPSF7-202ENST00000394888 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 NFE4Q86UQ8 179 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 CREBBPQ92793 2442 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 PMVKQ15126 192 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 LINC00467Q9BRT7 94 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 VWFP04275 2813 aa11.17□□□□□ -0.62
CPSF7-202ENST00000394888 IGLL5B9A064 214 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 TLN2Q9Y4G6 2542 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 TMEM141Q96I45 108 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 NHP2Q9NX24 153 aaKnown RBP11.16□□□□□ -0.62
CPSF7-202ENST00000394888 OTOGQ6ZRI0 2925 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 DNAJC9-AS1A6NH13 148 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 PTH2Q96A98 100 aa11.16□□□□□ -0.62
CPSF7-202ENST00000394888 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
CPSF7-202ENST00000394888 IGLV4-3A0A075B6K6 122 aa11.15□□□□□ -0.62
CPSF7-202ENST00000394888 UBE2D1P51668 147 aa11.15□□□□□ -0.62
CPSF7-202ENST00000394888 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-202ENST00000394888 TRPT1Q86TN4 253 aaKnown RBP11.15□□□□□ -0.62
CPSF7-202ENST00000394888 A0A0J9YY99 117 aa11.14□□□□□ -0.63
CPSF7-202ENST00000394888 ZNF56Q15929 161 aa11.14□□□□□ -0.63
CPSF7-202ENST00000394888 RHOHQ15669 191 aa11.14□□□□□ -0.63
CPSF7-202ENST00000394888 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
CPSF7-202ENST00000394888 CFAP126Q5VTH2 177 aa11.14□□□□□ -0.63
CPSF7-202ENST00000394888 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 F5H697 171 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 OR11H12B2RN74 326 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 GIG44P09565 113 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-202ENST00000394888 AZU1P20160 251 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 BEAN1Q3B7T3 259 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 TMEM86BQ8N661 226 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
CPSF7-202ENST00000394888 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 IGHV3-73A0A0B4J1V6 119 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 SYT8Q8NBV8 401 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 KIR2DL4Q99706 377 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
CPSF7-202ENST00000394888 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
CPSF7-202ENST00000394888 ZNF22P17026 224 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-202ENST00000394888 SONP18583 2426 aaKnown RBP11.11□□□□□ -0.63
CPSF7-202ENST00000394888 I3L3M4 83 aa11.11□□□□□ -0.63
CPSF7-202ENST00000394888 ZNF815PA8K554 130 aa11.1□□□□□ -0.63
CPSF7-202ENST00000394888 CEMP1Q6PRD7 247 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-202ENST00000394888 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
CPSF7-202ENST00000394888 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
CPSF7-202ENST00000394888 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
CPSF7-202ENST00000394888 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
CPSF7-202ENST00000394888 CD28P10747 220 aa11.1□□□□□ -0.63
CPSF7-202ENST00000394888 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
CPSF7-202ENST00000394888 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
CPSF7-202ENST00000394888 M0R2P5 195 aa11.09□□□□□ -0.63
CPSF7-202ENST00000394888 RRN3P1Q2M238 152 aa11.08□□□□□ -0.63
CPSF7-202ENST00000394888 LITAFQ99732 161 aa11.08□□□□□ -0.63
CPSF7-202ENST00000394888 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.63
CPSF7-202ENST00000394888 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-202ENST00000394888 ANK2Q01484 3957 aa11.08□□□□□ -0.64
CPSF7-202ENST00000394888 G3V4G9 280 aa11.08□□□□□ -0.64
CPSF7-202ENST00000394888 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
CPSF7-202ENST00000394888 C19orf73Q9NVV2 129 aa11.08□□□□□ -0.64
CPSF7-202ENST00000394888 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
CPSF7-202ENST00000394888 GTF2H5Q6ZYL4 71 aa11.07□□□□□ -0.64
CPSF7-202ENST00000394888 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
CPSF7-202ENST00000394888 RHODO00212 210 aa11.07□□□□□ -0.64
CPSF7-202ENST00000394888 C10orf126Q8N4M7 172 aa11.07□□□□□ -0.64
CPSF7-202ENST00000394888 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms